DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7b and grik5

DIOPT Version :9

Sequence 1:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001315085.1 Gene:grik5 / 798791 ZFINID:ZDB-GENE-070821-6 Length:1067 Species:Danio rerio


Alignment Length:747 Identity:130/747 - (17%)
Similarity:229/747 - (30%) Gaps:305/747 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SEMGRFKTLYIYTHTNSQSTGGHLEELLDQVLMIV---------PNNLQARR---LLLQQSMEYK 89
            ||:|.....|.|..|........|::::|:...||         |..|:..|   |..::..:..
Zfish   244 SELGMTSAFYKYILTTMDFPLLWLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWREGCDIN 308

  Fly    90 PYVHAVL--ALVDGLPSLSAIYARIRATQDLSHTLIYMSMPTDAYGEEMQATLRFLWR--LSVLN 150
            ||....|  ||:     ..|::..:.|.|:|:.:......|       :..|...:|:  .|::|
Zfish   309 PYPGPALSSALL-----FDAVHVVVSAVQELNRSQEIGVKP-------LSCTSPQIWQHGTSLMN 361

  Fly   151 VGVVLRPPGDHILMVSY------FPFSALHGCQVISANVVNRYQVGTKRWASQDYFPSKLGNFY- 208
                      ::.||.|      ..|::.......:.:::.:::.|.|          ::|.:| 
Zfish   362 ----------YLRMVEYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHK----------EIGIWYS 406

  Fly   209 -GCLLTCATWEDM-------------------PYLVWRP-----DGSGSFVGIEGALLQFMAENL 248
             ..||..:|..|:                   ||::.:.     :|:..:.|....:|:.:::.|
Zfish   407 NNTLLMNSTSLDINVSETLANKSLIITTILENPYVMRKINYQEFEGNEQYEGFCVDMLRELSDIL 471

  Fly   249 NFTV-------GLY--------WMNKEEVLATFDESGRIFDEIFGHHADFSLGGFHFKPSAGSEI 298
            .||.       |||        |            :|.: .|:....||.::..|.........|
Zfish   472 KFTYRIKLVDDGLYGAPEPNGSW------------TGMV-GELINRKADLAVAAFTITSEREKVI 523

  Fly   299 PYSQSTYYFMS---------HIMLVTNLQSAYSAYEKLSFPFTPLLWRAIGLVLILACLLLMLLV 354
            .:|:.   ||:         ||       .....|.....||:|.:|..:.|..:....:|.|..
Zfish   524 DFSKP---FMTLGISILYRVHI-------GRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLSA 578

  Fly   355 R-----W-------RHHHELPRNPYYELLVLTMGGNLEDRW-------------VPQRFPSRLVL 394
            |     |       |...:|..|.|      |:|.:|   |             :|:...:|.|.
Zfish   579 RLSPYEWYNPHPCLRERRDLLENQY------TLGNSL---WFPVGGFMQQGSEIMPRALSTRCVS 634

  Fly   395 LTWLFATLVLRSGYQSGMYQLLRQDTQRNPPQTISEVLAQHFTIQLAEVNEARILASLPELRPEQ 459
            ..|...||::.|.|.:.                    ||...|:|..||                
Zfish   635 GVWWAFTLIIISSYTAN--------------------LAAFLTVQRMEV---------------- 663

  Fly   460 LVYLEGSELQSFPALAQQSGSSARVAILTPYEYFGYFRKVHPMSRRLHLVRERIYTQQLAFYVRR 524
                   .::|...||.|:...              :..:|..|.....:..|..|     |.|.
Zfish   664 -------PIESPDDLADQTNIQ--------------YGTIHGGSTMTFFMNSRYQT-----YQRM 702

  Fly   525 HSHLVGVLNKQIQHAHTHGFLEHWTRQYVSAVDEKDESVARIASTSY-----STLD--------- 575
            .:::                   :::|....|...:|.:||:.::.|     ||::         
Zfish   703 WNYM-------------------YSKQPSVFVKSTEEGIARVVNSKYAFLLESTMNEYHRSLNCN 748

  Fly   576 -------------GID---GDPSLSE----------------------------SEEDQQVAPVR 596
                         ||.   |.|...|                            .|||.     |
Zfish   749 LTQIGGLLDTKGYGIGMPLGSPFRDELSLAVLQLQENNRLEILKRRWWEGGKCPKEEDH-----R 808

  Fly   597 QNVLSMRELAALFWLILWANLGAVVVFVLELL 628
            ...|.|..:..:|.:::...:.||.|.|:|.:
Zfish   809 AKGLGMENIGGIFVVLICGLIIAVFVAVMEFV 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7bNP_572410.2 None
grik5NP_001315085.1 PBP1_iGluR_Kainate_KA1_2 38..412 CDD:107389 37/199 (19%)
ANF_receptor 55..392 CDD:279440 32/169 (19%)
Periplasmic_Binding_Protein_Type_1 <313..383 CDD:299141 16/91 (18%)
Periplasmic_Binding_Protein_Type_2 427..797 CDD:304360 78/482 (16%)
Lig_chan 558..828 CDD:278489 58/364 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591850
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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