DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7b and grin3a

DIOPT Version :9

Sequence 1:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_009303361.1 Gene:grin3a / 564832 ZFINID:ZDB-GENE-130530-780 Length:1111 Species:Danio rerio


Alignment Length:685 Identity:120/685 - (17%)
Similarity:228/685 - (33%) Gaps:230/685 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 HLEELLDQVLMIVPNNLQARRLLLQQSMEYKPYVHAVLALVDG--------------LPSLSAIY 109
            ::|||..:.|   |..|.|...:.:.|:::  ||...|.||..              :|..:...
Zfish   365 NVEELRTEGL---PMGLLAHGRMGEPSLDH--YVQDALELVARAVGSAATVSPQLALIPGTTNCL 424

  Fly   110 ARIRATQDLSHTLIYMSMPTDAY-------GEEMQATL-----RFLWRLSVLNVGVVLRPPGDHI 162
            ||:.|....|.|.:...|.:.::       ..:.::|:     .|:|.|....:|   :|....:
Zfish   425 ARLEAKNLTSGTFLSRYMASTSFDGLSGCISVQEESTIISESHHFIWNLQHDPIG---KPMWTRL 486

  Fly   163 LMVSYFPFSALHGCQVISANVVNRYQVGTKRWASQ---DY-FPSKLGNFYGCLLTCATWEDMPYL 223
                   .|..||      .||..|.|...:..||   |: ..|:|.      |...|..:.|::
Zfish   487 -------GSWKHG------KVVMDYGVWPNKRRSQPGADWRHSSRLH------LRVVTLVEHPFV 532

  Fly   224 VWR--------PDG--------------SGSFVGIEGA------------------LLQFMAENL 248
            ..|        |.|              ...|.|::||                  ||:.:||::
Zfish   533 FTRDVDDEGLCPAGQLCLDPLTNDTALLESLFQGLQGANDTVPLEFKKCCYGYCIDLLEKLAEDM 597

  Fly   249 NFTVGLYWMNKEEVLATFDESGR---IFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSH 310
            .|...||.:...:..|.  ::||   :..::....|..::..|....:....|.::..  :|.:.
Zfish   598 GFDFDLYIVGDGKYGAY--KNGRWTGLVGDLMSGAAHLAVTSFSINSARSQVIDFTSP--FFSTS 658

  Fly   311 IMLVTNLQSAYSAYEKLSFPFTPLLWRAIGLVLILACLLLMLLVRWRHHHEL-PR---------- 364
            :.::...:...:......:|....:|..|.:.|.:..:.| .|..|:....: ||          
Zfish   659 LGILVRTRDTAAPIGAFMWPLHWSMWLGIFVSLHVTAVFL-TLYEWKSPFGMTPRGRNRDRVFSF 722

  Fly   365 ----NPYYELLVLTMGGNLEDRWVPQRFPSRLVLLTWLFATLVLRSGYQSGM---------YQLL 416
                |..|.:|.    |.......|:.:..|.::..|....|...|.|.:.:         |:.|
Zfish   723 SSALNVCYAILF----GRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEKTYEQL 783

  Fly   417 R--QDTQRNPPQ------TISEVLAQHFTIQLAEVNEARILASLPELR-----------PEQLVY 462
            .  .|.:.:.|.      |:.|..|:.:           :..|.||:.           |:.:.:
Zfish   784 SGIHDPKLHHPSQGFRFGTVRESSAEDY-----------VKKSFPEMHEYMRRYNAPTTPDGIDH 837

  Fly   463 L--EGSELQSF--------------------------PALAQQSGSSARVA-ILTPYEYFGYFRK 498
            |  :..:|.:|                          ..|.|.|..::.:: :::.|:..|:...
Zfish   838 LKDDPQKLDAFIMDKALLDYWAHADKXYISLLLTGYGIGLKQNSPLTSNISELVSQYKSDGFMDM 902

  Fly   499 VH-------PMSRRLHLVRERIYTQQLAFYVRRHSHL-----VGV-------LNKQIQH------ 538
            :|       |..:|...|     |:.|...::..|.|     |||       |.:.|.|      
Zfish   903 LHDKWYKVVPCGKRSFAV-----TETLQMGIKHFSGLFVMLCVGVALSLLTTLGEHIVHRWVIPR 962

  Fly   539 ---AHTHGFLEHWTRQYVSAV-----DEKDESVAR 565
               :..|.:..|.:::...|:     ::|.::||:
Zfish   963 MQESTEHKYWLHTSQRLHRALNPTFKEDKLQTVAK 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7bNP_572410.2 None
grin3aXP_009303361.1 Periplasmic_Binding_Protein_Type_1 36..502 CDD:299141 33/157 (21%)
ANF_receptor 132..452 CDD:279440 20/91 (22%)
PBP2_iGluR_NMDA_Nr3 518..908 CDD:270438 64/415 (15%)
Lig_chan 682..941 CDD:278489 45/279 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591823
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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