DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7b and Nmdar1

DIOPT Version :9

Sequence 1:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_730940.1 Gene:Nmdar1 / 40665 FlyBaseID:FBgn0010399 Length:997 Species:Drosophila melanogaster


Alignment Length:814 Identity:134/814 - (16%)
Similarity:258/814 - (31%) Gaps:252/814 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WLYILSCCSLVASTMESSSDWDLAEALAQVVANSEMGRFKTL--YIYTHTNSQST---------- 56
            ||.:||..:.....:..|||.|         ..:.:|||:|.  ..|...:.::|          
  Fly   164 WLEMLSHFAYTKVIIIHSSDTD---------GRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 219

  Fly    57 -GGHLEELLD------QVLMIVPNNLQARRLLLQQSMEYKPYVHAVLALV-----------DGLP 103
             ....|.|:|      :|.::..:...| :::.:.:.||.......:.:|           ||:.
  Fly   220 LESFTEHLIDMKTAQSRVYLMYASTEDA-QVIFRDAGEYNMTGEGHVWIVTEQALFSNNTPDGVL 283

  Fly   104 SL-------------SAIYARIRATQDLSHTLIYMSMPTDAYGE---EMQATLRFLWRLSVLNV- 151
            .|             .::|....|.:::.........|.|. |:   ..::..|....|...|: 
  Fly   284 GLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC-GDSAVNWESGKRLFQYLKSRNIT 347

  Fly   152 ----GVVLRPPGDHILMVSYFPFSALHGCQVISANVVNRYQVGTKRWA-------SQDYFPSKL- 204
                .|.....||.|    |..:..::..:....:||.::...:.|..       |:..:|.|. 
  Fly   348 GETGQVAFDDNGDRI----YAGYDVINIREQQKKHVVGKFSYDSMRAKMRMRINDSEIIWPGKQR 408

  Fly   205 ----GNFYGCLLTCATWEDMPYLVWRPDGSGSF------------------------VGIEGALL 241
                |......|...|.|:.|::..|..|...|                        .|....||
  Fly   409 RKPEGIMIPTHLRLLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNNSDATANEFCCRGYCIDLL 473

  Fly   242 QFMAENLNFT----------VGLYWM-NKEEVLATFDESGRIFDEIFGHHADFSLGGFHFKPSAG 295
            ..:::.:|||          .|.|.: |....:....|...:..|:....||..:......|...
  Fly   474 IELSKRINFTYDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNERADMIVAPLTINPERA 538

  Fly   296 SEIPYSQSTYYFMSHIMLVTNLQSAYSAYEKLSFPFTPLLWRAIGLVLILACLLLMLLVRWR--H 358
            ..|.:|:...|  ..|.::....|..|.......||:..||..:.:.:.:..|:|.||.|:.  .
  Fly   539 EYIEFSKPFKY--QGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFG 601

  Fly   359 HHELPRNPYYELLVLTMGGNLEDRW-----------VPQRFPSRLVLLTWLFATLVLRSGYQSGM 412
            ..:|..:...|...|.:...:...|           .|:.|.:|::.:.|....:::.:.|.:.:
  Fly   602 RFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANL 666

  Fly   413 YQLLRQDTQRNPPQTISEVLAQHFTIQLAEVNEARILASLPELRPEQLVYLEGSELQSFPALAQQ 477
            ...|..:.    |:|           :|:.:|:||:..::..|                 ..|..
  Fly   667 AAFLVLER----PKT-----------KLSGINDARLRNTMENL-----------------TCATV 699

  Fly   478 SGSSARVAILTPYEYFGYFRKVHPMSRRLHLVRERIY---------------------TQQLAFY 521
            .|||..:          |||:...:|.....:....|                     :.:|.:.
  Fly   700 KGSSVDM----------YFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDSSRLEYE 754

  Fly   522 VRRHSHLV-----------GV-LNK----------QIQHAHTHGFLEHWTRQYVSAVDEKDESVA 564
            ..:...||           |: |.|          .|...|..||:|...:|::..         
  Fly   755 ASKDCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFH--------- 810

  Fly   565 RIASTSYSTLDGIDGDPSLSESEEDQQVAPVRQNVLSMRELAALFWLILWANLGAVVVFVLELLL 629
                               ...:::.::.....|.|.::.:|.:|.|:.....|.|.:.::|::.
  Fly   811 -------------------GHVQQNCELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIY 856

  Fly   630 PRIKLRKILR---------KMKSDIKKQISKLVR 654
            .:.:::|..|         |.:..|:|:  |.:|
  Fly   857 KKHQVKKQKRLDIARHAADKWRGTIEKR--KTIR 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7bNP_572410.2 None
Nmdar1NP_730940.1 PBP1_iGluR_NMDA_NR1 12..405 CDD:107374 42/255 (16%)
ANF_receptor 58..371 CDD:279440 38/221 (17%)
PBP2_iGluR_NMDA_Nr1 417..818 CDD:270437 74/472 (16%)
HisJ 451..>558 CDD:223904 18/108 (17%)
Periplasmic_Binding_Protein_Type_2 <516..651 CDD:304360 26/136 (19%)
Lig_chan 575..838 CDD:278489 49/332 (15%)
CaM_bdg_C0 854..882 CDD:287524 3/27 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463109
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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