DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7b and GRIK4

DIOPT Version :9

Sequence 1:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001269399.1 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:682 Identity:123/682 - (18%)
Similarity:239/682 - (35%) Gaps:175/682 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SEMGRFKTLYIYTHTNSQSTGGHLEELLDQVLMIVPNNL------------QARRLLLQQSMEYK 89
            :|:|.....|.|..||.:.:...::.|:|..:.|:..::            |:.....|::.::.
Human   232 AELGMVSAYYTYIFTNLEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFAQSLNQSWQENCDHV 296

  Fly    90 PYVHAVL--ALVDGLPSLSAIYARIRATQDLSHTLIYMSMPTDA-------YGEEMQATLRFLWR 145
            |:....|  ||:     ..|:||.:.|.|:|:.:......|...       :|..:...||.: .
Human   297 PFTGPALSSALL-----FDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMV-E 355

  Fly   146 LSVLNVGVVLRPPG---DHILMVSYFPFSALHGCQVISANVVNRYQVGTKRW-----ASQD---Y 199
            |..|...:.....|   ::.|.:..|..:...             |:|  :|     .|.|   |
Human   356 LEGLTGHIEFNSKGQRSNYALKILQFTRNGFR-------------QIG--QWHVAEGLSMDSHLY 405

  Fly   200 FPSKLGNFYGCLLTCATWEDMPYLVWR-----PDGSGSFVGIEGALLQFMAENLNFTV------- 252
            ..:.....:...|...|..:.|||:.:     .:|:..:.|....:|:.:||.|.|..       
Human   406 ASNISDTLFNTTLVVTTILENPYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGD 470

  Fly   253 GLYWMNKEEVLATFDESGRIFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSHIMLVTNL 317
            |:|.:  .|...|:  :|.: .|:....||.::.|..........|.:|:.   ||:  :.::.|
Human   471 GVYGV--PEANGTW--TGMV-GELIARKADLAVAGLTITAEREKVIDFSKP---FMT--LGISIL 525

  Fly   318 QSAY----SAYEKLSFPFTPLLWRAIGLVLILACLLLMLLVR-----WRHHHELPRNPYYELLV- 372
            ...:    ..|.....||:|.:|..:.|..:....:|.|:.|     |...|...:. ...||| 
Human   526 YRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQG-RCNLLVN 589

  Fly   373 -LTMGGNLEDRW-------------VPQRFPSRLVLLTWLFATLVLRSGYQSGMYQLLRQDTQRN 423
             .::|.:|   |             .|:...:|.|...|...||::.|.|.:.:...|.......
Human   590 QYSLGNSL---WFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDV 651

  Fly   424 PPQTISEVLAQHFTIQLAEVNEARILASLPELRPEQLVYLEGSELQSFPALAQQSGSSARVAILT 488
            |.:::.: ||....|:...::..           ..:.:.:.|..|::..:              
Human   652 PIESVDD-LADQTAIEYGTIHGG-----------SSMTFFQNSRYQTYQRM-------------- 690

  Fly   489 PYEYFGYFRKVHPMSRRLHLVRERIYTQQLAF---------YVRRHSHLVGVLNKQIQHAHTHGF 544
             :.|. |.::.....:.......|:.....||         |.:|:.:|..:          .|.
Human   691 -WNYM-YSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQI----------GGL 743

  Fly   545 LEHWTRQY-----VSAV--DEKDESVARIASTSYSTL------DGIDGDPSLSESEEDQQVAPVR 596
            |:  |:.|     |.:|  ||.|.::.::...:...:      :|     .....|||.     |
Human   744 LD--TKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEG-----GKCPKEEDH-----R 796

  Fly   597 QNVLSMRELAALFWLILWANLGAVVVFVLELL 628
            ...|.|..:..:|.:::...:.|:.:.:||.|
Human   797 AKGLGMENIGGIFVVLICGLIVAIFMAMLEFL 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7bNP_572410.2 None
GRIK4NP_001269399.1 PBP1_iGluR_Kainate_KA1_2 26..400 CDD:107389 33/188 (18%)
ANF_receptor 43..382 CDD:279440 29/155 (19%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 75/423 (18%)
Lig_chan 547..816 CDD:278489 53/322 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155780
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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