DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7b and GRIK2

DIOPT Version :9

Sequence 1:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_068775.1 Gene:GRIK2 / 2898 HGNCID:4580 Length:908 Species:Homo sapiens


Alignment Length:694 Identity:119/694 - (17%)
Similarity:227/694 - (32%) Gaps:215/694 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MESSSDWDLAEALAQVVANS--------EMGRFKTLYIYTHTNSQSTGGHLEELLDQVLM----- 69
            :::.|.::|...:.|:.|::        ||.|.|..::....:.:...|.|::.|...:|     
Human   189 IKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYH 253

  Fly    70 ------------IVP----------------NNLQARRLLLQQSMEY-----KP----------- 90
                        :.|                .|.|...::.:.|||.     ||           
Human   254 YIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTT 318

  Fly    91 -------YVHAVLALVDGLPSLSAIYARIRATQDLSHTLIYMSMPTDAYGEEMQATLRFLWRLSV 148
                   .||.|...|...|.::....:....:.......:||:..:|:.|.:...:.|      
Human   319 DAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF------ 377

  Fly   149 LNVGVVLRPPGDHILMVSYFPFSALHGCQVISANVVNRYQVGTKRW---------ASQDYFPSKL 204
             |....||...|               ..|||.......::||  |         .||...|:.:
Human   378 -NKTNGLRTDFD---------------LDVISLKEEGLEKIGT--WDPASGLNMTESQKGKPANI 424

  Fly   205 -GNFYGCLLTCATWEDMPYLVWRPD-----GSGSFVGIEGALLQFMAENLNFTVGLYWMNKEEVL 263
             .:.....|...|..:.||::::..     |:..|.|....||:.::..|.||..:..:...:..
Human   425 TDSLSNRSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYG 489

  Fly   264 ATFDESGR---IFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSHIMLVTNLQSAY---- 321
            |..|.:|:   :..|:..|.||.::.     |.|   |.|.:......|...:...:...|    
Human   490 AQDDANGQWNGMVRELIDHKADLAVA-----PLA---ITYVREKVIDFSKPFMTLGISILYRKPN 546

  Fly   322 ----SAYEKLSFPFTPLLWRAIGLVLI-LACLLLMLL----VRWRHHHELPRNPYYELL------ 371
                ..:..|: |.:|.:|..|.|..: ::|:|.::.    ..|.:.|  |.||..:::      
Human   547 GTNPGVFSFLN-PLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPH--PCNPDSDVVENNFTL 608

  Fly   372 ----------VLTMGGNLEDRWVPQRFPSRLVLLTWLFATLVLRSGYQSGMYQLLRQDTQRNPPQ 426
                      ::..|..|    :|:...:|:|...|.|.||::.|.|.:.:...|..:...:|..
Human   609 LNSFWFGVGALMQQGSEL----MPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPID 669

  Fly   427 TISEVLAQHFTIQLAEVNEARILASLPELRPEQLVYLEGSELQSFPALAQQSGSSARVAILTPYE 491
            :..: ||:...|:...|.:.           ..:.:.:.|::.::..: ....||.|.::|....
Human   670 SADD-LAKQTKIEYGAVEDG-----------ATMTFFKKSKISTYDKM-WAFMSSRRQSVLVKSN 721

  Fly   492 YFGYFRKVHPMSRRLHLVRERIYTQQLAFYV---------RRHSHL------------------- 528
            ..|.               :|:.|...||.:         :|:.:|                   
Human   722 EEGI---------------QRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMG 771

  Fly   529 --------VGVLNKQIQHAHTHGFLEHWTRQYVSAVDEKDESVA 564
                    :.:|..| :....|...|.|.|......:|..|:.|
Human   772 SPYRDKITIAILQLQ-EEGKLHMMKEKWWRGNGCPEEESKEASA 814

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ir7bNP_572410.2 None
GRIK2NP_068775.1 PBP1_iGluR_Kainate 37..414 CDD:380605 40/248 (16%)
Periplasmic_Binding_Protein_Type_2 430..800 CDD:419667 72/413 (17%)
Glutamate binding. /evidence=ECO:0000250|UniProtKB:P42260 516..518 1/1 (100%)