DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7b and Grin2b

DIOPT Version :9

Sequence 1:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001350679.1 Gene:Grin2b / 14812 MGIID:95821 Length:1482 Species:Mus musculus


Alignment Length:836 Identity:139/836 - (16%)
Similarity:255/836 - (30%) Gaps:303/836 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SLVASTMESSSDW--------------DLAEALAQVVANSEMGRFKTLYIYTHTNSQSTGGHLEE 62
            |::.:.|| ..||              |....:...:.||                 ..|..|||
Mouse   155 SVMLNIME-EYDWYIFSIVTTYFPGYQDFVNKIRSTIENS-----------------FVGWELEE 201

  Fly    63 LL---------DQVLMIVPNNLQARRLLLQQSMEYKPYVHAVLALVDGL---------PSLSAIY 109
            :|         |..:......||:..:||..:.|...|:..|...| ||         |||.| .
Mouse   202 VLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATYIFEVANSV-GLTGYGYTWIVPSLVA-G 264

  Fly   110 ARIRATQDLSHTLIYMSMPTDAYGEEMQATLRFLWRLSVLNVGVVLRPPGDHILMVSYFPFSA-- 172
            .......:....||.:|.....||  :.|.:|.       .:.::.....|.:...|:.|...  
Mouse   265 DTDTVPSEFPTGLISVSYDEWDYG--LPARVRD-------GIAIITTAASDMLSEHSFIPEPKSS 320

  Fly   173 ---LHGCQVISANVVNRYQV-----GTKRWASQDYFP----------------SKLGNFYGCLLT 213
               .|..::..:|::|||.:     |.....|:|.:.                .::|.       
Mouse   321 CYNTHEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHPKLVIILLNKERKWERVGK------- 378

  Fly   214 CATWED----MPYLVW---------RPDGSGSFVGIEGA-------------------------- 239
               |:|    |.|.||         :.|...|.|.:|.|                          
Mouse   379 ---WKDKSLQMKYYVWPRMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRI 440

  Fly   240 -----------------------LLQFMAENLNFTVGLYWMNKEEVLATFDESGR--------IF 273
                                   :|:.:::::.||..||       |.|..:.|:        :.
Mouse   441 ISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLY-------LVTNGKHGKKINGTWNGMI 498

  Fly   274 DEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSHIMLVTNLQSAYSAYEKLSFPFTPLLWRA 338
            .|:....|..::|...........:.:  |..:..:.|.::.:..:...:......||:..:|  
Mouse   499 GEVVMKRAYMAVGSLTINEERSEVVDF--SVPFIETGISVMVSRSNGTVSPSAFLEPFSADVW-- 559

  Fly   339 IGLVLILACLLLMLLV--------------RWRHHHELPRNPYYEL--LVLTMGGNLEDRWVPQR 387
               |::...||::..|              |.......|..|.:.:  .:..:.|.:.:..||.:
Mouse   560 ---VMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQ 621

  Fly   388 FP----SRLVLLTWLFATLVLRSGYQSGMYQLLRQD----------------------------- 419
            .|    |::::..|.|..::..:.|.:.:...:.|:                             
Mouse   622 NPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTV 686

  Fly   420 ----TQRNPPQTISEVLAQHFTIQLAEVNEARILASLPELRPEQLVY-----------LEGSELQ 469
                |:||.....:|:.|.........|::|  |.||...:.:..:|           .||.:|.
Mouse   687 PNGSTERNIRNNYAEMHAYMGKFNQRGVDDA--LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLV 749

  Fly   470 SFP------------ALAQQSGSSARV--AILTPYEYF--GYFRKVHP--MSRRLHLVRERIYTQ 516
            :..            |:.:.||...:|  |||   :.|  |...::..  ::...|..:..:.:.
Mouse   750 TIGSGKVFASTGYGIAIQKDSGWKRQVDLAIL---QLFGDGEMEELEALWLTGICHNEKNEVMSS 811

  Fly   517 QL-------AFYVRRHSHLVGVLNKQIQHAHTHGFLEHWTRQ--YVSAVDEKDESVARIASTSYS 572
            ||       .||:...:..:.::....:|      |.:|..:  ::.....|...|..|:...||
Mouse   812 QLDIDNMAGVFYMLGAAMALSLITFICEH------LFYWQFRHCFMGVCSGKPGMVFSISRGIYS 870

  Fly   573 TLDGIDGDPSLSESEEDQQV--AP------VRQNVLSMRELAALFWLILWANLGAV 620
            .:.|:       ..||.|.|  :|      ...|:|.:...|...     |||..|
Mouse   871 CIHGV-------AIEERQSVMNSPTATMNNTHSNILRLLRTAKNM-----ANLSGV 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7bNP_572410.2 None
Grin2bNP_001350679.1 PBP1_iGluR_NMDA_NR2 33..388 CDD:380601 50/271 (18%)
PBP2_iGluR_NMDA_Nr2 403..803 CDD:270436 60/418 (14%)
NMDAR2_C 840..1482 CDD:402274 21/93 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846454
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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