DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7b and Grik5

DIOPT Version :9

Sequence 1:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:786 Identity:146/786 - (18%)
Similarity:234/786 - (29%) Gaps:320/786 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KTLYIYTHTNSQSTGGHLEELLDQVL--MIVPNNLQARRLLLQQSMEYKPYVHAVLALVDGLPSL 105
            :||.:....:|:.....|:|:.|..:  :|:..|.....|:|:.|:.....:....:|..||..:
Mouse   186 ETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRLSLNLSSPLGFPRSLPLGLSCV 250

  Fly   106 ---------SAIYARIRATQDL-----------SHTLIYMSM--PTDAYGEEMQATLRFLWRLSV 148
                     ||.|..|..|.|.           |..::..||  .:..:..|...:|...||.: 
Mouse   251 LQASELGMTSAFYKYILTTMDFPILHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWREN- 314

  Fly   149 LNVGVVLRPPGDHILMVSYFPFSALHGCQVISA-NVVNRYQ-VGTKRWA--SQDYFP-------- 201
            ........|.....||     |.|:|  .|:|| ..:||.| :|.|..|  |.:.:|        
Mouse   315 CEASTYPGPALSAALM-----FDAVH--VVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNY 372

  Fly   202 ------------------------------------SKLGNFYG--CLLTCATWEDM-------- 220
                                                .::|.:|.  .|...||..|:        
Mouse   373 LRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLAN 437

  Fly   221 -----------PYLVWRPD-----GSGSFVGIEGALLQFMAENLNFTV-------GLY------- 255
                       ||::.||:     |:..|.|....:|:.:||.|.|..       |||       
Mouse   438 KTLVVTTILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNG 502

  Fly   256 -WMNKEEVLATFDESGRIFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSHIMLVTNLQS 319
             |            :|.:.:.|....||.::..|.........|.:|:.   ||:  :.::.|..
Mouse   503 SW------------TGMVGELINRQKADLAVAAFTITAEREKVIDFSKP---FMT--LGISILYR 550

  Fly   320 AY----SAYEKLSFPFTPLLWRAIGLVLILACLLLMLLVR-----WRHHHELPR-------NPYY 368
            .:    ..|.....||:|.:|..:.|..:....:|.|..|     |.:.|...|       |.| 
Mouse   551 VHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQY- 614

  Fly   369 ELLVLTMGGNLEDRW-------------VPQRFPSRLVLLTWLFATLVLRSGYQSGMYQLLRQDT 420
                 |:|.:|   |             :|:...:|.|...|...||::.|.|.:.         
Mouse   615 -----TLGNSL---WFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTAN--------- 662

  Fly   421 QRNPPQTISEVLAQHFTIQLAEVNEARILASLPELRPEQLVYLEGSELQSFPALAQQSGSSARVA 485
                       ||...|:|..||                       .::|...||.|        
Mouse   663 -----------LAAFLTVQRMEV-----------------------PVESADDLADQ-------- 685

  Fly   486 ILTPYEYFGYFRKVHPMSRRLHLVRERIYTQQLAFYVRRHSHLVGVLNKQIQHAHTHGFLEHWTR 550
              |..||    ..:|..|........|..|     |.|..:::                   .::
Mouse   686 --TNIEY----GTIHAGSTMTFFQNSRYQT-----YQRMWNYM-------------------QSK 720

  Fly   551 QYVSAVDEKDESVARIASTSY-----STLD----------------------GID---GDPSLSE 585
            |....|...:|.:||:.::.|     ||::                      ||.   |.|...|
Mouse   721 QPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDE 785

  Fly   586 ----------------------------SEEDQQVAPVRQNVLSMRELAALFWLILWANLGAVVV 622
                                        .|||.     |...|.|..:..:|.:::...:.||.|
Mouse   786 ITLAILQLQENNRLEILKRKWWEGGRCPKEEDH-----RAKGLGMENIGGIFVVLICGLIIAVFV 845

  Fly   623 FVLELL 628
            .|:|.:
Mouse   846 AVMEFI 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7bNP_572410.2 None
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 47/245 (19%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:419667 84/477 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846680
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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