DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7b and Grik2

DIOPT Version :9

Sequence 1:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_011241422.1 Gene:Grik2 / 14806 MGIID:95815 Length:943 Species:Mus musculus


Alignment Length:727 Identity:122/727 - (16%)
Similarity:227/727 - (31%) Gaps:246/727 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MESSSDWDLAEALAQVVANS--------EMGRFKTLYIYTHTNSQSTGGHLEELLDQVLM----- 69
            :::.|.::|...:.|:.|::        ||.|.|..::....:.:...|.|::.|...:|     
Mouse   189 IKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYH 253

  Fly    70 ------------IVP----------------NNLQARRLLLQQSMEY-----KP----------- 90
                        :.|                .|.|...::.:.|||.     ||           
Mouse   254 YIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTT 318

  Fly    91 -------YVHAVLALVDGLPSLSAIYARIRATQDLSHTLIYMSMPTDAYGEEMQATLRFLWRLSV 148
                   .||.|...|...|.::....:....:.......:||:..:|:.|.:...:.|      
Mouse   319 DAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF------ 377

  Fly   149 LNVGVVLRPPGDHILMVSYFPFSALHGCQVISANVVNRYQVGTKRW---------ASQDYFPSKL 204
             |....||...|               ..|||.......::||  |         .||...|:.:
Mouse   378 -NKTNGLRTDFD---------------LDVISLKEEGLEKIGT--WDPSSGLNMTESQKGKPANI 424

  Fly   205 -GNFYGCLLTCATWEDMPYLVWRPD-----GSGSFVGIEGALLQFMAENLNFTVGLYWMNKEEVL 263
             .:.....|...|..:.||::::..     |:..|.|....||:.::..|.||..:..:...:..
Mouse   425 TDSLSNRSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYG 489

  Fly   264 ATFDESGR---IFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSHIMLVTNLQSAY---- 321
            |..|.:|:   :..|:..|.||.::.     |.|   |.|.:......|...:...:...|    
Mouse   490 AQDDVNGQWNGMVRELIDHKADLAVA-----PLA---ITYVREKVIDFSKPFMTLGISILYRKPN 546

  Fly   322 ----SAYEKLSFPFTPLLWRAIGLVLILACLLLMLLVR-----W------RHHHELPR------- 364
                ..:..|: |.:|.:|..|.|..:....:|.::.|     |      .|:|...|       
Mouse   547 GTNPGVFSFLN-PLSPDIWMYILLAYLGVSCVLFVIARQSKFSWFKYPNCSHYHHSQRCLCTQHL 610

  Fly   365 ---------------NPY------------YELL---------VLTMGGNLEDRWVPQRFPSRLV 393
                           ||:            :.||         ::..|..|    :|:...:|:|
Mouse   611 ESYMELCLFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSEL----MPKALSTRIV 671

  Fly   394 LLTWLFATLVLRSGYQSGMYQLLRQDTQRNPPQTISEVLAQHFTIQLAEVNEARILASLPELRPE 458
            ...|.|.||::.|.|.:.:...|..:...:|..:..: ||:...|:...|.:.           .
Mouse   672 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD-LAKQTKIEYGAVEDG-----------A 724

  Fly   459 QLVYLEGSELQSFPALAQQSGSSARVAILTPYEYFGYFRKVHPMSRRLHLVRERIYTQQLAFYV- 522
            .:.:.:.|::.::..: ....||.|.::|......|.               :|:.|...||.: 
Mouse   725 TMTFFKKSKISTYDKM-WAFMSSRRQSVLVKSNEEGI---------------QRVLTSDYAFLME 773

  Fly   523 --------RRHSHL---------------------------VGVLNKQIQHAHTHGFLEHWTRQY 552
                    :|:.:|                           :.:|..| :....|...|.|.|..
Mouse   774 STTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQ-EEGKLHMMKEKWWRGN 837

  Fly   553 VSAVDEKDESVA 564
            ....:|..|:.|
Mouse   838 GCPEEESKEASA 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7bNP_572410.2 None
Grik2XP_011241422.1 PBP1_iGluR_Kainate 37..414 CDD:380605 40/248 (16%)
Periplasmic_Binding_Protein_Type_2 430..835 CDD:389745 75/446 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846676
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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