DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPA and ACA2

DIOPT Version :10

Sequence 1:NP_572407.3 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001318303.1 Gene:ACA2 / 817367 AraportID:AT2G28210 Length:276 Species:Arabidopsis thaliana


Alignment Length:296 Identity:68/296 - (22%)
Similarity:133/296 - (44%) Gaps:49/296 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IACSAIVLLCS--------------SEVLSSWEEWWTYDGISGPSFWGLINPQWNMCNKGRRQSP 68
            |.|...::|.|              .||....|..:.::..:||:.||.:.|:|.||.||..|||
plant     6 IRCFIFLVLTSFVTTVSCLSAATDYREVEDEHEFSYEWNQENGPAKWGKLRPEWKMCGKGEMQSP 70

  Fly    69 IDVVPDKLLFDPYLRPLHIDKHKVSGTLHNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYI 133
            ||::..::....:|:.|.......:.||.|.|..::.:..::....:.::|      .:::.:.:
plant    71 IDLMNKRVRLVTHLKKLTRHYKPCNATLKNRGHDMMLKFGEEGSGSITVNG------TEYKLLQL 129

  Fly   134 HYGTENVRGSEHFIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNPELRI 198
            |:.:.    |||.:.|..|..|:          |.:.|..:.|..:|  :::.:||. |:..|.:
plant   130 HWHSP----SEHTMNGRRFALEL----------HMVHENINGSLAVV--TVLYKIGR-PDSFLGL 177

  Fly   199 ITSTFNKVLYRGFSTPIRHISV---RSLLPNTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQ 260
            :.:..:.:..:..:.  :::.|   |.:...:..:..|.||.|.|.|.::.:|.:|.|...:||.
plant   178 LENKLSAITDQNEAE--KYVDVIDPRDIKIGSRKFYRYIGSLTTPPCTQNVIWTVVKKVRTVTKN 240

  Fly   261 ELYQLRRLMQGSESTPKAPLGNNARPVQSLHHRTVR 296
            ::..||..:..:..|       ||||||..:.|.|:
plant   241 QVKLLRVAVHDNSDT-------NARPVQPTNKRVVK 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_572407.3 alpha_CARP_X_XI_like 46..300 CDD:239395 61/254 (24%)
ACA2NP_001318303.1 alpha_CA_prokaryotic_like 48..270 CDD:239398 61/254 (24%)

Return to query results.
Submit another query.