DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and ca15b

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_005169499.1 Gene:ca15b / 791844 ZFINID:ZDB-GENE-040426-2222 Length:320 Species:Danio rerio


Alignment Length:302 Identity:82/302 - (27%)
Similarity:135/302 - (44%) Gaps:52/302 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CSTAGFIACSAIVLLCSSEVLSSWEEWWTYDGISGPS----FWGLINPQWNMCNKGRRQSPIDVV 72
            ||.:|.|:                   |.|   ..||    .|.:|..:  .|| |.:||||::|
Zfish    18 CSVSGSIS-------------------WCY---HSPSCSEVTWPIIAEK--HCN-GTQQSPINIV 57

  Fly    73 PDKLLFDPYLRPLHIDKHKVSGTL---HNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIH 134
            ...:..:..|.......:..|..|   .|||.|:  :|..|.|: :.::||.|..|:...|.::|
Zfish    58 TANVKANANLTSFTYVGYNDSTALTVIKNTGTSI--QVTLDPKK-MRVAGGNLPGRFASTEFHLH 119

  Fly   135 YGTEN-VRGSEHFIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNPE-LR 197
            :|..: :.||||.:.|..||.|:.|  .||.: .|.|:    |..::|:.:... .||..|| .:
Zfish   120 WGNGSAMPGSEHTVNGKRFPMELHI--VNKPV-SNTSD----SLAVLGVFIEAS-NETGKPESWK 176

  Fly   198 IITSTFNKVLYRGFSTPI-RHISVRSLLPNTDH--YITYEGSTTHPGCWESTVWIIVNKPIYITK 259
            .:||...:::..|....: |:.|:..||...|.  |..|.||.|.|.|.|..:|.:...||.:::
Zfish   177 TLTSYLTRIVKAGDKASLFRNFSMDDLLSGVDRTKYYRYLGSLTTPNCNEGVIWTVFKDPIRVSR 241

  Fly   260 Q--ELYQLRRLMQGSESTPKAPLGNNARPVQSLHHRTVRTNI 299
            .  :|:.....:..|.::|.  :.|..|.||.::.|.|.:.:
Zfish   242 DLIDLFSTTVYINNSSNSPL--MTNIFRSVQPVNGRIVMSQV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 76/268 (28%)
ca15bXP_005169499.1 alpha_CA_IV_XV_like 48..279 CDD:239391 70/243 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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