DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPA and CA4

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_005257696.1 Gene:CA4 / 762 HGNCID:1375 Length:336 Species:Homo sapiens


Alignment Length:311 Identity:88/311 - (28%)
Similarity:139/311 - (44%) Gaps:48/311 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AIVLLCSSEVLSSWEEWWTYDGISGPSFWGLINP-QW-NMCNKGRRQSPIDVVPDKLLFDPYLRP 84
            |::.|.::...:|.|..|.|:..:..|.:..:.| :| ..|.|. |||||::|..|...|..|..
Human     6 ALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKD-RQSPINIVTTKAKVDKKLGR 69

  Fly    85 LHI---DKHKVSGTLHNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTENVRGSEHF 146
            ...   || |.:.|:.|.|.|::..::    ...:||||.|...||.:::::|:.....:||||.
Human    70 FFFSGYDK-KQTWTVQNNGHSVMMLLE----NKASISGGGLPAPYQAKQLHLHWSDLPYKGSEHS 129

  Fly   147 IQGYSFPGEIQI-YGFNKELYHNMSEAQHKSQGIVGLSLMVQIGE------------TPNPELRI 198
            :.|..|..|:.| :...|....|:.|||.....|..|:.:|:||.            :.:|.|..
Human   130 LDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEIGRMNWPPPLAPCRLSQDPSLPF 194

  Fly   199 ITSTFNKVLYRGF---------------STPIRHISVRSLLPNTD---HYITYEGSTTHPGCWES 245
            ...|   .:..||               ||.:...|:..|||..:   ||..|.||.|.|.|.|.
Human   195 QAGT---QVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEK 256

  Fly   246 TVWIIVNKPIYITKQELYQL-RRLMQGSESTPKAPLGNNARPVQSLHHRTV 295
            .||.:..:||.:.::::... ::|....|.|  ..:.:|.||:|.|..|||
Human   257 VVWTVFREPIQLHREQILAFSQKLYYDKEQT--VSMKDNVRPLQQLGQRTV 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 82/287 (29%)
CA4XP_005257696.1 alpha_CA_IV_XV_like 48..307 CDD:239391 78/269 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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