DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CARPA and Car10

DIOPT Version :9

Sequence 1:	NP_001284986.1	Gene:	CARPA / 31687	FlyBaseID:	FBgn0029962	Length:	333	Species:	Drosophila melanogaster
Sequence 2:	NP_001348636.1	Gene:	Car10 / 72605	MGIID:	1919855	Length:	328	Species:	Mus musculus

Alignment Length:	323	Identity:	127/323 - (39%)
Similarity:	202/323 - (62%)	Gaps:	23/323 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 AGFIACSAIVLLCSSEVLSSWEEWWTY-DGISG-----PSFWGLINPQWNMCNKGRRQSPIDVVP 73
            |.||.|    :..........|.||.| :.:.|     ||||||:|..||:|:.|:||||:::..
Mouse    13 ANFIVC----ISAQQNSPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWNLCSVGKRQSPVNIET 73

  Fly    74 DKLLFDPYLRPLHIDK--HKVSGTLHNTGQSLVFRVDKDTKQH-VNISGGPLAYRYQFEEIYIHY 135
            ..::|||:|.||.|:.  .|||||::|||:.:..|:|   |:| |||||||:.|.::.|||.:|:
Mouse    74 SHMIFDPFLTPLRINTGGRKVSGTMYNTGRHVSLRLD---KEHLVNISGGPMTYSHRLEEIRLHF 135

  Fly   136 GTENVRGSEHFIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNPEL-RII 199
            |:|:.:||||.:.|.:|.||:|:..:|.|||.|::||.....|:|.:|:.:::.::.||.| |::
Mouse   136 GSEDSQGSEHLLNGQAFSGEVQLIHYNHELYTNVTEAAKSPNGLVVVSIFIKVSDSSNPFLNRML 200

  Fly   200 T-STFNKVLYRGFSTPIRHISVRSLLPNTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQELY 263
            . .|..::.|:..:..::.:::..|.|.|..:|||:||.|.|.|:|:..|||:|||:|||:.:::
Mouse   201 NRDTITRITYKNDAYLLQGLNIEELYPETSSFITYDGSMTIPPCYETASWIIMNKPVYITRMQMH 265

  Fly   264 QLRRLMQGSESTPKAPLGNNARPVQSLHHRTVRTNIDFK-RNKNQYACP-SMYKDMYYRANRW 324
            .||.|.|...|.....:.:|.||||.|::|.:||||:|. :.|:   || :..:.:.||.|.|
Mouse   266 SLRLLSQNQPSQIFLSMSDNFRPVQPLNNRCIRTNINFSLQGKD---CPNNRAQKLQYRVNEW 325

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CARPA	NP_001284986.1	alpha_CARP_X_XI_like	46..300	CDD:239395	110/263 (42%)
Car10	NP_001348636.1	alpha_CARP_X_XI_like	46..302	CDD:239395	109/258 (42%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	234	1.000	Domainoid score	I2378
eggNOG	1	0.900	-	-		E1_COG3338
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	248	1.000	Inparanoid score	I3228
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG45680
OrthoDB	1	1.010	-	-		D1377476at2759
OrthoFinder	1	1.000	-	-		FOG0002299
OrthoInspector	1	1.000	-	-		mtm8832
orthoMCL	1	0.900	-	-		OOG6_106561
Panther	1	1.100	-	-	O	PTHR18952
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1354
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	12	11.880