DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and ca10a

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001032198.1 Gene:ca10a / 641327 ZFINID:ZDB-GENE-051030-123 Length:328 Species:Danio rerio


Alignment Length:323 Identity:127/323 - (39%)
Similarity:200/323 - (61%) Gaps:20/323 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FIACSAIVLLCSSEVLSS---WEEWWTY-DGISG-----PSFWGLINPQWNMCNKGRRQSPIDVV 72
            ||...|.:::|||...:.   .|.||.| :.:.|     ||||||:|..||:|:.|:||||:::.
Zfish     8 FIILQANLIVCSSAQPNPPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWNLCSVGKRQSPVNIE 72

  Fly    73 PDKLLFDPYLRPLHIDK--HKVSGTLHNTGQSLVFRVDKDTKQH-VNISGGPLAYRYQFEEIYIH 134
            ...::|||:|.||.::.  .||.||::|||:.:..|:|   |:| |||||||:.|.::.|||.:|
Zfish    73 TSHMIFDPFLTPLRLNTGGRKVGGTMYNTGRHVSLRLD---KEHLVNISGGPMTYSHRLEEIRLH 134

  Fly   135 YGTENVRGSEHFIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNPEL-RI 198
            :|:|:.:||||.:.|.:|.||:|:..:|.|||.|.:||.....|:|.:|:.::|.||.|..| |:
Zfish   135 FGSEDGQGSEHLLNGQAFSGEVQLIHYNHELYTNYTEAAKSPNGLVIVSIFMKISETSNSFLNRM 199

  Fly   199 IT-STFNKVLYRGFSTPIRHISVRSLLPNTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQEL 262
            :. .|..::.|:..:..:..:::..:.|.|..:||||||.|.|.|:|:..||::|||||:||.::
Zfish   200 LNRDTITRITYKNDAYLLSGLNIEEVYPETASFITYEGSMTIPPCYETATWILMNKPIYVTKMQM 264

  Fly   263 YQLRRLMQGSESTPKAPLGNNARPVQSLHHRTVRTNIDFKRNKNQYACP-SMYKDMYYRANRW 324
            :.:|.|.|...|.....:.:|.||||.|::|.:||||:|......  || :..:.:.||.|.|
Zfish   265 HSMRLLSQNQPSQIFLSMSDNVRPVQPLNNRCIRTNINFSMQGKD--CPNNRAQKLQYRVNEW 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 109/263 (41%)
ca10aNP_001032198.1 alpha_CARP_X_XI_like 46..302 CDD:239395 108/258 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 233 1.000 Domainoid score I2331
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I3235
OMA 1 1.010 - - QHG45680
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0002299
OrthoInspector 1 1.000 - - mtm6345
orthoMCL 1 0.900 - - OOG6_106561
Panther 1 1.100 - - O PTHR18952
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1354
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.880

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