DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and PTPRG

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_016862450.1 Gene:PTPRG / 5793 HGNCID:9671 Length:1485 Species:Homo sapiens


Alignment Length:318 Identity:81/318 - (25%)
Similarity:124/318 - (38%) Gaps:69/318 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SSWEEWWTYDGISGPSFWGLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLR------PLHIDKHK 91
            :|.:.:|.|.|..||..|...:..   |. ||.|||||::      |.|.|      .|.:|...
Human    54 ASGDPYWAYSGAYGPEHWVTSSVS---CG-GRHQSPIDIL------DQYARVGEEYQELQLDGFD 108

  Fly    92 VSGT----LHNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTEN-VRGSEHFIQGYS 151
            ...:    :.|||:::...:    |....:||..|..|::.|::..|:|..| ..||||.|.|..
Human   109 NESSNKTWMKNTGKTVAILL----KDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRR 169

  Fly   152 FPGE----------------------------------------IQIYGFNKELYHNMSEAQHKS 176
            ||.|                                        :||:.:|.:.:.:...|..::
Human   170 FPVEAEDARGGDIMLMLSQGMRFILLGLKKEQFEERKSWTTYQSMQIFFYNPDDFDSFQTAISEN 234

  Fly   177 QGIVGLSLMVQIGETPNPELRIITSTFNKVLYRGFSTPIRHISVRSLLP-NTDHYITYEGSTTHP 240
            :.|..:::..|:....|..|..|......|::....|.:....:|.||| :...|..|.||.|.|
Human   235 RIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTP 299

  Fly   241 GCWESTVWIIVNKPIYITKQEL---YQLRRLMQGSESTPKAPLGNNARPVQSLHHRTV 295
            .|.|...||:..:|:.|:..:|   |.:....|.........|.||.||.|.||.|.|
Human   300 PCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVV 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 77/305 (25%)
PTPRGXP_016862450.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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