DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPA and car15

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_005169278.1 Gene:car15 / 568143 ZFINID:ZDB-GENE-091204-152 Length:312 Species:Danio rerio


Alignment Length:318 Identity:84/318 - (26%)
Similarity:133/318 - (41%) Gaps:55/318 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IVLLCSSEVLSSWEEWWTYD-GISGPSFWGLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLRPLH 86
            ::|:.|..:|:..::.:.|| ....|..||...|.   |:.              |.|.:..|::
Zfish     6 LMLMMSVLLLARTDDDFCYDEDHCDPYAWGDSYPS---CHP--------------LLDSHHSPIN 53

  Fly    87 IDKHKV------SGTLH-------------NTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIY 132
            :|.|.:      |..||             |.|.|:|..|.    ..:.:|||.|...|:..:::
Zfish    54 LDHHLMKNHSLDSLQLHGFNLTHKGQWWLTNQGHSVVLEVG----DGMQVSGGGLPATYRTFQLH 114

  Fly   133 IHYGTENVRGSEHFIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNPELR 197
            .|:|:.:..||||.:....||.|:.|... |..:.|::.|.....||..|.:.|.:....|...:
Zfish   115 FHWGSVSSNGSEHTLDHLRFPMEMHIVNI-KSTHPNLTSALEDPTGIAVLGVFVDVTYLHNENFQ 178

  Fly   198 IITSTFNKVLYRGFSTPIRHISVRSLLP--NTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQ 260
            .|:|..:.|.|:|.:..|:...:.:|||  |...|..|.||.|.|.|.|..:|.|...|:||:  
Zfish   179 SISSALSYVAYKGQTKSIKPFPLVNLLPQNNLTQYYRYHGSLTTPPCSEVVLWTIYEVPVYIS-- 241

  Fly   261 ELYQLRRLMQGSESTP-----KAPLGNNARPVQSLHHRTVRTNIDFKRNKN---QYAC 310
             ..|..:.:.|..||.     :|.|.:|.|.:...:.|.|..:.|.|...|   ..||
Zfish   242 -WAQFEQFVSGIYSTEEEAEIQALLHDNYRHIHPTYSRPVYASKDAKLLTNGVSSLAC 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 74/279 (27%)
car15XP_005169278.1 alpha_CA_IV_XV_like 46..282 CDD:239391 68/243 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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