DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and ca7

DIOPT Version :10

Sequence 1:NP_572407.3 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_957107.1 Gene:ca7 / 564201 ZFINID:ZDB-GENE-040426-1786 Length:263 Species:Danio rerio


Alignment Length:266 Identity:88/266 - (33%)
Similarity:141/266 - (53%) Gaps:10/266 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WTYDGISGPSFWGLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLRPLHIDKHK-VSGTLHNTGQS 102
            |.|...:|||.|....|    ..:|.||||||:||.:.:||..|.|:.:..:. .|.::.|.|.|
Zfish     6 WGYGEDNGPSAWHKDYP----IAEGNRQSPIDIVPSEAVFDSKLSPISLSYNNCTSLSISNNGHS 66

  Fly   103 LVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTENVRGSEHFIQGYSFPGEIQIYGFNKELYH 167
            :|... .||.:...|:||||...|:.::.:.|:|::...||||.:.|.:|..|:.:..:|...|.
Zfish    67 VVVEF-VDTDERSVITGGPLENMYRLKQFHFHWGSKGCCGSEHTVAGKTFVSELHLVHWNANKYK 130

  Fly   168 NMSEAQHKSQGIVGLSLMVQIGETPNPELRIITSTFNKVLYRGFSTPIRHISVRSLLPNTDHYIT 232
            :.|||.....|:..|.:.::.|: .:..|..||.....|.::|.....:..:.:.||||:..|.|
Zfish   131 SFSEAAAAPDGLAVLGIFLETGD-EHRALHQITDALYMVRFKGSLAEFKGFNPKCLLPNSLEYWT 194

  Fly   233 YEGSTTHPGCWESTVWIIVNKPIYITKQELYQLRRLM-QGSESTPKAPLGNNARPVQSLHHRTVR 296
            |.||.|.|..:||..||::.:|||::::::.:.|.|: .|.|...:..:.||.||.|.|..|.||
Zfish   195 YPGSLTTPPLYESVTWIVLKEPIYVSEKQMGKFRTLLFNGEEEEDRNRMENNYRPPQPLKGRMVR 259

  Fly   297 TNIDFK 302
            .:  ||
Zfish   260 AS--FK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_572407.3 alpha_CARP_X_XI_like 46..300 CDD:239395 84/255 (33%)
ca7NP_957107.1 alpha_CA_VII 26..262 CDD:239402 79/239 (33%)

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