DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and CAH16

DIOPT Version :10

Sequence 1:NP_572407.3 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001287620.1 Gene:CAH16 / 50101 FlyBaseID:FBgn0040628 Length:286 Species:Drosophila melanogaster


Alignment Length:271 Identity:77/271 - (28%)
Similarity:118/271 - (43%) Gaps:47/271 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QWN----------MCNKGRRQSPI--D-------VVPDKLLFDPY---LRPLHIDKHKVSGTLHN 98
            :||          :|:.|:.||||  |       |:|....:..|   .||.:|         .|
  Fly    25 EWNYLKNGKDWEDLCSSGKHQSPILLDSRTARKWVLPGITFWHYYRLLKRPFYI---------RN 80

  Fly    99 TGQSLVFRVDKDTK-QHVNISGGPLAYRYQFEEIYIHYGTENVRGSEHFIQGYSFPGEIQIYGFN 162
            .|.|:...:...:. :...|:||.|..||..:.::.|:|:...|||||.|....|..||.|...|
  Fly    81 NGHSISLDIPVTSNGRKPFITGGRLKGRYYADGLHFHWGSYKSRGSEHLINKRRFDAEIHIVHRN 145

  Fly   163 KELYHNMSEAQHKSQGIVGLSLMVQIGETPN----PELRIITSTFNKVLYRGFSTPIRHISVRSL 223
             |.|.|:::|..:..|:..:::||.|....|    |..|::.:.....:....:|.....|:..|
  Fly   146 -EKYRNIAQAVRQKDGLAVVAIMVAIVRKDNAKSTPLSRLMEAVVRVPIEDSNATVFGQSSLDQL 209

  Fly   224 LPNTDH--YITYEGSTTHPGCWESTVWIIVNKPIYITKQEL--YQLRRLMQGSESTPKAPLGNNA 284
            :....|  :.|||||.|.|.|.|:..||:..:...:|...:  :.|.|...|..      |.||.
  Fly   210 IGGVSHRDFFTYEGSLTTPLCDETVTWIVFTETTTVTMSSVSKFWLLRDHWGHR------LINNY 268

  Fly   285 RPVQSLHHRTV 295
            |.||.|::|||
  Fly   269 RIVQDLNNRTV 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_572407.3 alpha_CARP_X_XI_like 46..300 CDD:239395 77/271 (28%)
CAH16NP_001287620.1 Carb_anhydrase 33..281 CDD:459707 75/263 (29%)

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