Protein Alignment CARPA and Ca6

DIOPT Version :10

• Sequence 1: NP_572407.3
• Gene: CARPA / 31687
• FlyBaseID: FBgn0029962
• Length: 333
• Species: Drosophila melanogaster
• Sequence 2: NP_001128313.1
• Gene: Ca6 / 298657
• RGDID: 70516
• Length: 312
• Species: Rattus norvegicus
• Alignment Length: 284
• Identity: 80/284 - (28%)
• Similarity: 137/284 - (48%)
• Gaps: 29/284 - (10%)

  Fly    39 WTYDGISG--PSFWGLINPQ-WNMCNKGRRQSPIDVVPDKLLFDPYLRPLHIDKHKVSG---TLH 97
            |:|.|..|  .|.|    |: :..|. |.|||||||...::.|...|.|||:..::..|   ::.
  Rat    21 WSYSGDDGLEESRW----PEKYPSCG-GERQSPIDVKRREVHFSSSLLPLHMVNYEEEGLELSMT 80

  Fly    98 NTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYG--TENVRGSEHFIQGYSFPGEIQIYG 160
            |.|.::  ::.......:..|.|.:   |:.::::.|:|  ...:.||||.|.|.....||.:..
  Rat    81 NNGHTV--QITLPNTMSMRDSDGTV---YRTKQMHFHWGGRDSEISGSEHTIDGMRHAIEIHLVH 140

  Fly   161 FNKELYHNMSEAQHKSQGIVGLSLMVQIGE-TPNPELRIITSTFNKVLYRGFSTPIRHISVRSLL 224
            || |.|....:|..:..|:..::::|::.: |.|.......|....|.|.|.:|.:|::::|::|
  Rat   141 FN-EKYETYEKAVDQPDGLAVMAVLVKVEDYTENDYYSTFISELENVKYTGQTTTLRNVNIRNML 204

  Fly   225 P-NTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQELYQLRR-LMQGSESTPKAPLGNNARPV 287
            | :..||.||:||.|.|.|.|:..|.:......|:|.:..::.. :|.....|    :.|..|..
  Rat   205 PGDIRHYYTYQGSLTTPPCTENVKWFVFQDSATISKAQAERIENAVMDHHNQT----IRNGYRRT 265

  Fly   288 QSLHHRTVRTNIDF---KRNKNQY 308
            |.||:|.|..|..:   :.:||.:
  Rat   266 QPLHNRVVEANFPYSPDEVSKNHF 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CARPA	NP_572407.3	alpha_CARP_X_XI_like	46..300	CDD:239395	75/264 (28%)
Ca6	NP_001128313.1	alpha_CA_VI	30..278	CDD:239399	74/262 (28%)