DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and Car14

DIOPT Version :10

Sequence 1:NP_572407.3 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_006501505.1 Gene:Car14 / 23831 MGIID:1344341 Length:460 Species:Mus musculus


Alignment Length:263 Identity:80/263 - (30%)
Similarity:135/263 - (51%) Gaps:16/263 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WTYDGISGPSFWGLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLRPLHIDKHKVSGT----LHNT 99
            |||:|..|...|....|:   |. |..||||::..|.::|||.|..:....:...||    |||.
Mouse    22 WTYEGPHGQDHWPTSYPE---CG-GDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLDLHNN 82

  Fly   100 GQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTE-NVRGSEHFIQGYSFPGEIQIYGFNK 163
            |.::  ::......|:    |.|..:|...::::|:|.. ::.||||.|...:...|:.:..::.
Mouse    83 GHTV--QLSLPPTLHL----GGLPRKYTAAQLHLHWGQRGSLEGSEHQINSEATAAELHVVHYDS 141

  Fly   164 ELYHNMSEAQHKSQGIVGLSLMVQIGETPNPELRIITSTFNKVLYRGFSTPIRHISVRSLLP-NT 227
            :.|.::|||..|.||:..|.:::::|||.||....|.|..:::.|:...|.:...|||.|.| ..
Mouse   142 QSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSRLHEIRYKDQKTSVPPFSVRELFPQQL 206

  Fly   228 DHYITYEGSTTHPGCWESTVWIIVNKPIYITKQELYQLRRLMQGSESTPKAPLGNNARPVQSLHH 292
            :.:..|.||.|.|.|::|.:|.:.|:...|:..:|.:|:..:..:|..|..||..|.|..|.|:.
Mouse   207 EQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSSTEEDPSEPLVQNYRVPQPLNQ 271

  Fly   293 RTV 295
            ||:
Mouse   272 RTI 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_572407.3 alpha_CARP_X_XI_like 46..300 CDD:239395 76/256 (30%)
Car14XP_006501505.1 alpha_CA_XII_XIV 29..278 CDD:239400 76/256 (30%)

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