DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and cah-3

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001370788.1 Gene:cah-3 / 181713 WormBaseID:WBGene00000281 Length:246 Species:Caenorhabditis elegans


Alignment Length:270 Identity:75/270 - (27%)
Similarity:116/270 - (42%) Gaps:47/270 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WTY--DGISGPSFWGLINPQWNMCNKGRRQSPIDV---------VPDKLLFDPYLRPLHIDKHKV 92
            |:|  |...||:.|          ..|:.||||::         ..|.:.|..|       .|.:
 Worm     5 WSYCDDDECGPNRW----------PTGQHQSPINIDLGEVERKDTHDGIKFVNY-------DHPI 52

  Fly    93 SGTLHNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTENVRGSEHFIQGYSFPGEIQ 157
            .|.:.|.|.| |....:...:|..|.||.|...|:..:.:.|:|..:..||||.:.|..:|.|: 
 Worm    53 QGDIVNNGHS-VQMTPELRSEHPEIYGGGLDQVYRLVQYHFHWGENDNEGSEHTLGGLRYPAEL- 115

  Fly   158 IYGFNKELYHNMSEAQHKSQGIVGLSLMV-QIGETPNPELRIITSTFNKVLYRGFSTPIRHISVR 221
                  .|.|...|...| ..:||:.|.: :.|:..:.|.|::....|....    |.:.::.:.
 Worm   116 ------HLVHQGVEDPGK-LAVVGVFLQLGKEGKALSNEERVLGKLCNPETV----TRVENVRLS 169

  Fly   222 SLLP-NTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQELYQLRRLMQGSESTPKAPLGNNAR 285
            ..|| |...:..||||.|.|.|.|...|.|..:|:.:|..:| :|.|.:|..|   |.|:..|.|
 Worm   170 EKLPANKRSFWRYEGSLTTPPCSEIVTWTIFTEPVTVTHDQL-ELFRQVQDIE---KRPIKKNYR 230

  Fly   286 PVQSLHHRTV 295
            |.|:|:.|.:
 Worm   231 PTQNLNDRKI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 72/261 (28%)
cah-3NP_001370788.1 Carb_anhydrase 5..239 CDD:215000 74/267 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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