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Protein Alignment CARPA and Car2

DIOPT Version :9

Sequence 1:	NP_001284986.1	Gene:	CARPA / 31687	FlyBaseID:	FBgn0029962	Length:	333	Species:	Drosophila melanogaster
Sequence 2:	NP_001344263.1	Gene:	Car2 / 12349	MGIID:	88269	Length:	260	Species:	Mus musculus

Alignment Length:	265	Identity:	74/265 - (27%)
Similarity:	127/265 - (47%)	Gaps:	10/265 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly    39 WTYDGISGPSFWGLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLRPLHIDKHK-VSGTLHNTGQS 102
            |.|...:||..|....|..|    |.||||:|:.......||.|:||.|...| .|.::.|.|.|
Mouse     5 WGYSKHNGPENWHKDFPIAN----GDRQSPVDIDTATAQHDPALQPLLISYDKAASKSIVNNGHS 65

  Fly   103 LVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTENVRGSEHFIQGYSFPGEIQIYGFNKELYH 167
            .....| |::.:..:.||||:..|:..:.:.|:|:.:.:||||.:....:..|:.:..:|.: |.
Mouse    66 FNVEFD-DSQDNAVLKGGPLSDSYRLIQFHFHWGSSDGQGSEHTVNKKKYAAELHLVHWNTK-YG 128

  Fly   168 NMSEAQHKSQGIVGLSLMVQIGETPNPELRIITSTFNKVLYRGFSTPIRHISVRSLLPNTDHYIT 232
            :..:|..:..|:..|.:.::||.. :..|:.:....:.:..:|......:....||||....|.|
Mouse   129 DFGKAVQQPDGLAVLGIFLKIGPA-SQGLQKVLEALHSIKTKGKRAAFANFDPCSLLPGNLDYWT 192

  Fly   233 YEGSTTHPGCWESTVWIIVNKPIYITKQELYQLRRLMQGSESTPKAPLGNNARPVQSLHHRTVRT 297
            |.||.|.|...|...||::.:||.::.:::...|.|....|...:..:.:|.||.|.|.:|.::.
Mouse   193 YPGSLTTPPLLECVTWIVLREPITVSSEQMSHFRTLNFNEEGDAEEAMVDNWRPAQPLKNRKIKA 257

  Fly   298 NIDFK 302
            :  ||
Mouse   258 S--FK 260

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.