DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and Car11

DIOPT Version :10

Sequence 1:NP_572407.3 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_006540651.1 Gene:Car11 / 12348 MGIID:1336193 Length:344 Species:Mus musculus


Alignment Length:275 Identity:102/275 - (37%)
Similarity:161/275 - (58%) Gaps:12/275 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 EEWWTY------DGISGPSFWGLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLRPLHIDK--HKV 92
            |:||:|      :.:.||.||||:|..|::|..|:||||:||...::|:||:|.||.:..  .|:
Mouse    32 EDWWSYKENLQGNFVPGPPFWGLVNAAWSLCAVGKRQSPVDVELKRVLYDPFLPPLRLSTGGEKL 96

  Fly    93 SGTLHNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTENVRGSEHFIQGYSFPGEIQ 157
            .|||:|||:.:.|.  ..::..||:|||||.|.::..|:.:.:|..:..||||.|....|..|:|
Mouse    97 RGTLYNTGRHVSFL--PASRPVVNVSGGPLLYSHRLSELRLLFGARDGAGSEHQINHEGFSAEVQ 159

  Fly   158 IYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNPEL-RIIT-STFNKVLYRGFSTPIRHISV 220
            :..||:|||.|:|.|.....|:..|||.|.:..:.||.| |::. .|..::.|:..:..::.:|:
Mouse   160 LIHFNQELYGNLSAASRGPNGLAILSLFVNVAGSSNPFLSRLLNRDTITRISYKNDAYFLQDLSL 224

  Fly   221 RSLLPNTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQELYQLRRLMQGSESTPKAPLGNNAR 285
            ..|.|.:..:|||:||.:.|.|.|:..||::::.:.||..:::.||.|.|...|.....|..|.|
Mouse   225 ELLFPESFGFITYQGSLSTPPCSETVTWILIDRALNITSLQMHSLRLLSQNPPSQIFQSLSGNGR 289

  Fly   286 PVQSLHHRTVRTNID 300
            |:|.|.||.:|.|.|
Mouse   290 PLQPLAHRALRGNRD 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_572407.3 alpha_CARP_X_XI_like 46..300 CDD:239395 97/257 (38%)
Car11XP_006540651.1 alpha_CARP_X_XI_like 48..304 CDD:239395 97/257 (38%)

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