DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and ca1

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_002939198.1 Gene:ca1 / 100496485 XenbaseID:XB-GENE-957160 Length:262 Species:Xenopus tropicalis


Alignment Length:262 Identity:78/262 - (29%)
Similarity:129/262 - (49%) Gaps:9/262 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WTYDGISGPSFWGLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLRPLHIDKHKVS-GTLHNTGQS 102
            |.||..:||..|..:.|..|    |..||||||...:...|..|:.|.|..:..| .:|.|.|.|
 Frog     6 WGYDSHNGPDQWHKLYPIAN----GDSQSPIDVKSGEAKADESLKSLSIRYNSDSIKSLVNVGHS 66

  Fly   103 LVFRVDKDTKQHVN-ISGGPLAYRYQFEEIYIHYGTENVRGSEHFIQGYSFPGEIQIYGFNKELY 166
              |:|..:.|::.: ::.|||...|:..:.:.|:|..|..||||.:.|..:..|:.:..:|.:.|
 Frog    67 --FQVLAEDKENPSVVAQGPLKATYRLNQFHFHWGASNDFGSEHTVDGKGYAAELHLVHWNSDKY 129

  Fly   167 HNMSEAQHKSQGIVGLSLMVQIGETPNPELRIITSTFNKVLYRGFSTPIRHISVRSLLPNTDHYI 231
            .:.:||.....|...:::.:::|.: :|.|:.:......:..:|......:....:|||.:..|.
 Frog   130 SSFAEASKNPDGCAVVTVFIKVGSS-HPGLQRVVEALELIAAKGKQAAFTNFDASTLLPASMDYW 193

  Fly   232 TYEGSTTHPGCWESTVWIIVNKPIYITKQELYQLRRLMQGSESTPKAPLGNNARPVQSLHHRTVR 296
            ||:||.|||...|...|||..:||..:.:::...||::..:|.....|:..|.||.|.|..|.||
 Frog   194 TYQGSLTHPPLLECVTWIIFKEPISASSEQINLFRRILSSAEGEEACPVLANHRPTQPLKGREVR 258

  Fly   297 TN 298
            .:
 Frog   259 AS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 75/255 (29%)
ca1XP_002939198.1 alpha_CA 2..261 CDD:381753 78/262 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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