DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPA and ca11

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_002938168.2 Gene:ca11 / 100493884 XenbaseID:XB-GENE-6037596 Length:330 Species:Xenopus tropicalis


Alignment Length:306 Identity:117/306 - (38%)
Similarity:191/306 - (62%) Gaps:20/306 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GFIACSAIVLLCSSEVLS--------SWEEWWTY------DGISGPSFWGLINPQWNMCNKGRRQ 66
            ||:..|.::|..|:.:.:        ::||||.|      ..:.||:||||:|..||:|..|:||
 Frog     3 GFLWRSVLILQASAAIYTAAQFSPAKTYEEWWAYKEAVQGSFVPGPAFWGLVNSAWNLCTIGKRQ 67

  Fly    67 SPIDVVPDKLLFDPYLRPLHIDK--HKVSGTLHNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFE 129
            |||::...:::|||:|.||.:..  ..||||:||||:.:.||:||:  |.||||||||.|.::.|
 Frog    68 SPININTSQIIFDPFLPPLRLSMTGTTVSGTMHNTGRHVSFRLDKE--QPVNISGGPLLYNHRLE 130

  Fly   130 EIYIHYGTENVRGSEHFIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNP 194
            |:.:|:|:||..||||.:...:..||:|:..:|::||.|::||.....|:..:||.:.:.:..|.
 Frog   131 EVMLHFGSENSIGSEHLMNKETSAGEVQLIHYNQDLYSNVTEASRNPNGLAVISLFLNVADNSNS 195

  Fly   195 EL-RIIT-STFNKVLYRGFSTPIRHISVRSLLPNTDHYITYEGSTTHPGCWESTVWIIVNKPIYI 257
            .| |::. .|..::.:|..:|.|:.:|:..|.|:|..::||:||.|.|.|:|:..||::::|:.|
 Frog   196 FLNRMLNRETITRISFRNEATYIQDLSIEDLYPDTFGFLTYQGSMTIPPCYETVTWIVIDRPLNI 260

  Fly   258 TKQELYQLRRLMQGSESTPKAPLGNNARPVQSLHHRTVRTNIDFKR 303
            |..:::.||.|.|...|.....:.:|.||||.|.||.:|.|:||::
 Frog   261 TSMQMHSLRLLSQNQPSQIFQSMSDNFRPVQPLFHRGLRGNLDFRK 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 105/257 (41%)
ca11XP_002938168.2 alpha_CARP_X_XI_like 47..303 CDD:239395 105/257 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 231 1.000 Domainoid score I2386
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 242 1.000 Inparanoid score I3233
OMA 1 1.010 - - QHG45680
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0002299
OrthoInspector 1 1.000 - - mtm9493
Panther 1 1.100 - - O PTHR18952
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1354
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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