DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPA and ca14

DIOPT Version :9

Sequence 1:NP_001284986.1 Gene:CARPA / 31687 FlyBaseID:FBgn0029962 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001103521.1 Gene:ca14 / 100126213 XenbaseID:XB-GENE-855636 Length:343 Species:Xenopus tropicalis


Alignment Length:284 Identity:87/284 - (30%)
Similarity:143/284 - (50%) Gaps:19/284 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 CSAIVLLCSSEVLSSWEEWWTYDGISGPSFWGLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLRP 84
            |.::::|..|.|.....| |||.|..|...|.:..|.   |. |..||||::....:.:|..|.|
 Frog     3 CLSLLILSISHVTVRGSE-WTYAGHHGQENWPVTYPD---CG-GTAQSPINIQTSNISYDESLPP 62

  Fly    85 LHIDKHKVSG----TLHNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGT-ENVRGSE 144
            :..:.:...|    ||.|.|.|    |:......:.:.|.|..::  ..::::|:|: ....|||
 Frog    63 IEPEGYNTPGNQPFTLTNNGHS----VELSLPSSMTLRGLPNTFK--AAQLHLHWGSPAKQAGSE 121

  Fly   145 HFIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNPELRIITSTFNKVLYR 209
            |.:.|..||.|:.|..:|.:.|.::|||::|..|:..|.:..:||.|.||....|....:.:.|:
 Frog   122 HRLDGEEFPAELHIVHYNSDKYADISEAKNKPDGLAVLGVFFEIGATDNPAYANILHHLDNIRYK 186

  Fly   210 GFSTPIRHISVRSLLP-NTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQELYQLRRLMQGSE 273
            ..:..:...:||.||| |.:.|..|:||.|.|.|::|.:|.:...|:.|::.:|.:|:..:..:.
 Frog   187 DQTVSVPSFNVRHLLPENLEEYFRYQGSLTTPPCYQSVLWTVFYHPVEISRSQLEKLQTTLYSTT 251

  Fly   274 ST--PKAPLGNNARPVQSLHHRTV 295
            :|  |...||||.|..|.|:.|||
 Frog   252 ATEVPPEVLGNNVREAQLLNSRTV 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPANP_001284986.1 alpha_CARP_X_XI_like 46..300 CDD:239395 78/258 (30%)
ca14NP_001103521.1 alpha_CA 28..279 CDD:294017 78/258 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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