DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7a and grid2

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:657 Identity:119/657 - (18%)
Similarity:248/657 - (37%) Gaps:104/657 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 MTPLVAAALEILAEQVSPSQSTLAVMDLTQDAEHRDERQEQLMTIILRSVGSEMALR-TFQKPPA 90
            |:|..|.|  .:.|.|   ::.|...|......:.:.....:..::::|:|....:| ||     
Zfish   234 MSPATAKA--FITEVV---ETNLVAFDCQWIIINEEISDMDVQELVMKSIGRLTLVRQTF----- 288

  Fly    91 EVPASFVVFLVNSAQAFNTL-------GFHFTDIHSTREFNFLILLTHRMSSRAERLQVLRDISR 148
            .:|.:.....|.:....||.       .....:|.:...::.::||.:....:.|..:.....|.
Zfish   289 PLPQNTSQRCVRNNHRINTSLCDPKDPKAQMLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASL 353

  Fly   149 TCVR-----FHTSNVILLTEKRDGVV-LVYAYRLLNMDCDLSVNLELI-----DIYKNGLFR--- 199
            :|:|     :.....:|.|.|:.||. |.......:...:.:::.|::     :....|:.|   
Zfish   354 SCIRKGSKPWQGGKSMLETVKKGGVSGLTSLLEFNDNGSNPNIHFEILGTNYGEDRGRGVSRLAT 418

  Fly   200 ----HGHEARSFNRVL--SLSGCPLQVSWYPLPPFVSFIGNSSDPEERAQIWRLTGIDGELIKLL 258
                ||......:|.|  ::.|..|:|......|||....|.....::.|     |...:::..|
Zfish   419 WDPIHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQ-----GFSIDVLDAL 478

  Fly   259 ASIFDFRI-LLEEPCNKCLSPDIKDDCSGCFDQVIISNSSILIGAMSGSHQHRSHFSFTSSYHQS 322
            |:...|:. :...|.:|..|.......:|...:::...:.:.:.|::.:.:..|...||:.|...
Zfish   479 ANYLGFKYEIYVAPDHKYGSQQADGTWNGLIGELVFKRADVGLSALTITPERESVVDFTTRYMDY 543

  Fly   323 SLVFIMHMSSQFGAVAQLAVPFTVIVWLALVVSSLLLVLVLWMRNRLVCGRSDLASHALQVLTTL 387
            |:..::..:.:...:.....||.:.:|..:..:.||:..::::.|.|...|..:.|    |.:|.
Zfish   544 SVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGTLVYLLNWLNPPRLPMGS----VSSTT 604

  Fly   388 MGNPL---------EARSLPRSS-RLRILYAGWLLLVLVLRVVYQGKL------------FDSFR 430
            :.|.:         :...:|.:: ..|::...|.|..|::...|...|            ..|.:
Zfish   605 LYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTISRIENSIQSLQ 669

  Fly   431 -------LPYHKPLPTEISELIRSNYTLINQEYLD-YYPRELTVLTRNG--------SKDRFDYI 479
                   |||...|.:.:.:.:||..  :|....| .|.:...::.|.|        ||:....:
Zfish   670 DLAKQTDLPYGTVLDSAVYDQVRSKG--MNPFERDPMYSQMWRMINRTGGAENNVEESKEGIRKV 732

  Fly   480 QGLGKEGKFTTTSLIATMEYYNMMHWSTSRLTHIKEHIFLYQMVIYLRRHSLLKFAFDRKIKQLL 544
                |.|:|......|.:||..:.....|..| :..::......:.::..|..:..|.::|.:|.
Zfish   733 ----KYGRFAFVWDAAVLEYVAINDEDCSLYT-VSNNVADRGYGMAMQHGSPYRDIFSQRILELQ 792

  Fly   545 SAG-----IIGYFVREFDACQYRKPFEEDYEVTPIPLDSFCGLYYISLIWLSAAVVAFILELLSQ 604
            ..|     .:.::.|: ..|....|.......:.:.:.||.|::::    |:|.||...| :.:.
Zfish   793 QNGDMDILKLKWWPRD-SPCDLYSPVGTRKSGSALDIHSFAGVFFV----LAAGVVLSCL-IATV 851

  Fly   605 RIVWLRR 611
            ...|.||
Zfish   852 ETWWTRR 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..427 CDD:107386 35/202 (17%)
ANF_receptor 42..404 CDD:279440 31/179 (17%)
PBP2_iGluR_delta_2 440..806 CDD:270449 68/381 (18%)
Lig_chan 568..841 CDD:278489 51/288 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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