DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7a and CG11155

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:658 Identity:115/658 - (17%)
Similarity:228/658 - (34%) Gaps:204/658 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SQSTLAVMDLTQDAEHRDERQEQLMTIILRSVGSEMALRTFQKPPAEVPASFVVFLVNSAQAFNT 109
            |:..|.|::..|..:|.                   .|.|....|.....|.::|  :|..||..
  Fly   284 SKRYLEVINQMQKLQHN-------------------GLDTINGSPYIQTESALMF--DSVYAFAN 327

  Fly   110 LGFHFTDIHSTREFNFLILLTHRMSSRAERLQVLRDISRTCVRFHTSNVILLTEKRDGVVLVYAY 174
             |.||.::.:.:.|                  .::::|  |....|.|        ||:.|   |
  Fly   328 -GLHFLNLDNHQNF------------------YIKNLS--CTSDQTWN--------DGISL---Y 360

  Fly   175 RLLN--MDCDLSVNLELIDIYKNGLFRHGHEARSFNRVLSLSGCPLQV--SWYPLPPFVSFIGNS 235
            ..:|  :...|:..::.::..:| :|:..        :|.|....:|.  .|:|....     |.
  Fly   361 NQINAAITDGLTGTVQFVEGRRN-IFKLD--------ILKLKQEKIQKVGYWHPDDGV-----NI 411

  Fly   236 SDP------------------EERAQIW-----RLTG---IDG---ELIKLLASIFDFRILLEEP 271
            |||                  |||..:.     .|||   .:|   :|:|.:|:...|:..:|  
  Fly   412 SDPTAFYDSNIANITLVVMTREERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIE-- 474

  Fly   272 CNKCLSPD--------IKDDCSGCFDQVIISNSSILIGAMSGSHQHRSHFSFTSSYHQSSLVFIM 328
                |.||        ..:..:|...:::...:.:.:.:|:.::...|...||..:....:..:.
  Fly   475 ----LVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILF 535

  Fly   329 HM-SSQFGAVAQLAVPFTVIVWLALVVSSLLLVLVLWM---------RNRLVCGR-SDLASHALQ 382
            .: :||...:.....|..:.:||.::.:.:|:...|::         :|...|.: :|:..:...
  Fly   536 KVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFS 600

  Fly   383 VLTT---LMGNPLEARS--LPRSSRLRILYAGWLLLVLVLRVVYQGKLFDSFRLPYHKPLP---- 438
            :..:   :.|..|...|  .|:::..||:...|....|::...|...| .:|........|    
  Fly   601 ISNSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANL-AAFLTVERMISPIESA 664

  Fly   439 ------TEIS----------ELIRSNYTLINQEYLDYYP-RELTVLTRNGSKDRFDYIQGLGK-- 484
                  ||||          ...|.:...|.|:...|.. |:..|..:.       |..|:.:  
  Fly   665 SDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAVFVKT-------YEDGIKRVM 722

  Fly   485 EGKFTTTSLIATMEYYNMMHWSTSR---LTHI-------------------KEHIFLYQMVIYLR 527
            ||.:      |.:....|:.::..|   ||.|                   ::.|.|  .::.|:
  Fly   723 EGSY------AFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISL--AILELQ 779

  Fly   528 RHSLLKFAFDRKIKQLLSAGIIGYFVREFDACQYRKPFEEDYEVTPIPLDSFCGLYYISLIWLSA 592
            ...:::..:|:            ::....|.|. |....::.:...:.:::..|::.:.|..|:.
  Fly   780 EKGIIQILYDK------------WWKNTGDVCN-RDDKSKESKANALGVENIGGVFVVLLCGLAL 831

  Fly   593 AVVAFILE 600
            |||..|.|
  Fly   832 AVVVAIFE 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 34/192 (18%)
ANF_receptor 61..393 CDD:279440 30/170 (18%)
PBP2_iGluR_Kainate 424..793 CDD:270432 66/402 (16%)
Lig_chan 555..829 CDD:278489 48/302 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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