DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7a and KaiR1D

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster


Alignment Length:656 Identity:113/656 - (17%)
Similarity:209/656 - (31%) Gaps:226/656 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FHHLWLLMGLRSLAMGALHPPQPEAMTPLVAAALEILAEQVSPSQSTLAVMDLTQDAEHRDERQE 66
            ||....:.||.::.:.|:..||...           .|..|......:.:..|....::|..|:.
  Fly    79 FHAGKRVCGLLNIGVAAIFGPQSSH-----------TASHVQSICDNMEIPHLENRWDYRLRRES 132

  Fly    67 QLM-------------------------TIILRSVGSEMALRTFQKPPAEVPASFVVFLVNSAQA 106
            .|:                         |||..:....:.|:...|.....|....|..::.:..
  Fly   133 CLVNLYPHPNTLSKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTPFPITVRQLSDSGD 197

  Fly   107 FNTLGFHFTDIHSTREFNFLILLT----HRMSSRAERLQVLRDISR---TCVRFHTSNVILLTEK 164
            :..|   ...|.::.|.:.::..:    |.:..:|:::.::.|...   |.:..||.|   |.|.
  Fly   198 YRPL---LKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVN---LDEF 256

  Fly   165 RDGVVLVYAYRLLNMDCDLSVNLELIDIYKNGLFRHGH--EARS-----------FNRVLSLSGC 216
            |.|...:..:||:| :..:|..:....|.:.||.|..:  ..||           |.:.|.....
  Fly   257 RYGGTNITGFRLIN-EKIVSDVVRQWSIDEKGLLRSANLTTVRSETALMYDAVHLFAKALHDLDT 320

  Fly   217 PLQVSWYPLPPFVSFIGNSSDPEERAQIWRLTGIDGELIKLLASIFDFRILLEEPCNKCLSPDIK 281
            ..|:..:|    :|..|.|:        |: .|.         |:.::..::|   .|.|:..||
  Fly   321 SQQIDIHP----ISCDGQST--------WQ-HGF---------SLINYMKIVE---MKGLTNVIK 360

  Fly   282 DDCSG-----CFDQVIISNSSI-LIGAMSGSHQHRSHFSFTSSYHQSSLVFIMHMSSQFGAVAQL 340
            .|..|     ..|.|.::.:.| .||..:.:.....:|:.|.|..|..:                
  Fly   361 FDHQGFRTDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEI---------------- 409

  Fly   341 AVPFTVIVWLALVVSSLLLVLVLWMRNRLVCGRSDLASHALQVLTTLMGNPLEAR---SLPRSSR 402
                                            .::|.:..| |:||::.||...|   ::|.|..
  Fly   410 --------------------------------EANLKNKTL-VVTTILSNPYCMRKESAIPLSGN 441

  Fly   403 LRILYAGWLLLVLVLRVVYQGKLFDSFRLPYHKPLPTEISELIRSNYTLINQEYLDYYPRELTVL 467
                                    |.|. .|...|..|||:.:..||.:              .|
  Fly   442 ------------------------DQFE-GYAVDLIHEISKSLGFNYKI--------------QL 467

  Fly   468 TRNGSKDRFDYIQGLGKEGKFTTTSLIATMEYYNMMHWSTSRLTHIKEHIFLYQMVIYLRRHSLL 532
            ..:||....:.:.|                |:..|:.    .|...:..:.:..:.|...|...:
  Fly   468 VPDGSYGSLNKLTG----------------EWNGMIR----ELLEQRADLAIADLTITFEREQAV 512

  Fly   533 KFAFDRKIKQLLSAGIIGYFVREFDACQYRKPFEEDYE----VTPIPLDSFCGLYYISLIWLSAA 593
            .|.     ...::.|:         :..||||.::...    ::|:.||.:   .|::..:|..:
  Fly   513 DFT-----TPFMNLGV---------SILYRKPIKQPPNLFSFLSPLSLDVW---IYMATAYLGVS 560

  Fly   594 VVAFIL 599
            |:.|||
  Fly   561 VLLFIL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 66/360 (18%)
ANF_receptor 42..378 CDD:279440 63/341 (18%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 42/229 (18%)
Lig_chan 547..823 CDD:278489 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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