Sequence 1: | NP_572406.1 | Gene: | Ir7a / 31686 | FlyBaseID: | FBgn0029961 | Length: | 614 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106655.1 | Gene: | Gria4 / 29629 | RGDID: | 61863 | Length: | 902 | Species: | Rattus norvegicus |
Alignment Length: | 308 | Identity: | 57/308 - (18%) |
---|---|---|---|
Similarity: | 100/308 - (32%) | Gaps: | 79/308 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 285 SGCFDQVIISNSSILIGAMSGSHQHRSHFSFTSSYHQSSL-VFIMHMSSQFGAVAQLAVPFTVIV 348
Fly 349 WLALVVSSLLLVLVLWMRNRLVC-------------GRSDLASHALQVLTTL---MGNPLE--AR 395
Fly 396 SLPRSSRLRILYAGWLLLVLVLRVVYQGKLFDSFRLPYHKPLPTEISELIRSNYTLINQEYLDYY 460
Fly 461 PRELTVLTRNGSKDRFDYIQGLGKEGKFTTTSLIATMEYYNMMHWSTSRLTHIKEHIFLYQMVIY 525
Fly 526 LR---------RHSLLKFAFDRKIKQLLSAGIIGYFVREFDACQYRKP 564 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir7a | NP_572406.1 | None | |||
Gria4 | NP_001106655.1 | PBP1_iGluR_AMPA_GluR4 | 28..398 | CDD:107383 | |
ANF_receptor | 39..380 | CDD:279440 | |||
PBP2_iGluR_AMPA_GluR4 | 414..795 | CDD:270445 | 57/308 (19%) | ||
Lig_chan | 546..825 | CDD:278489 | 50/245 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |