DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7a and GRIN2A

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:686 Identity:123/686 - (17%)
Similarity:243/686 - (35%) Gaps:186/686 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LTQDAEHRDERQEQLMTIILRSVGSEMALRTFQKPPAEVPASFVVFLVNSAQAFNTLGFHF---- 114
            :|.|....|.:.:    :.|:.:.|.:.|....|..|       |.:::.|::....|:.|    
Human   256 ITLDTSFEDAKTQ----VQLKKIHSSVILLYCSKDEA-------VLILSEARSLGLTGYDFFWIV 309

  Fly   115 -------TDIHSTREF-NFLI--------------------LLTHRMSSRAERLQVLRDISRTC- 150
                   |:: ..:|| :.||                    :||...||..|:...:.:...:| 
Human   310 PSLVSGNTEL-IPKEFPSGLISVSYDDWDYSLEARVRDGIGILTTAASSMLEKFSYIPEAKASCY 373

  Fly   151 -------VRFHTSNVILLTEKRDGVVLVY---AYR--------LLNMDCDLSVNLELIDIYKNGL 197
                   |..||.:..::....||..|.:   .|:        :||.|.:    .|.:..::|..
Human   374 GQMERPEVPMHTLHPFMVNVTWDGKDLSFTEEGYQVHPRLVVIVLNKDRE----WEKVGKWENHT 434

  Fly   198 FRHGHEARSFNRVLSLSGCP-----LQVSWYPLPPFV--------------------SFIGNSSD 237
            ....|..  :.|..|.|.|.     |.:......|||                    .|:..::.
Human   435 LSLRHAV--WPRYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNS 497

  Fly   238 PEERAQIWR-LTGIDGELIKLLASIFDFRILLEEPCNKCLSPDIKDDCSGCFDQVIISNSSILIG 301
            ..|...:.: ..|...:::|.|:....|...|....|......:.:..:|...:|:...:.:.:|
Human   498 TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVG 562

  Fly   302 AMSGSHQHRSHFSFTSSYHQSSLVFIMHMSSQFGAVAQLAV--PFTVIVW-----LALVVSSLLL 359
            :::.:.:......|:..:.::.:..::..|:  |.|:..|.  ||:..||     :.|:||::.:
Human   563 SLTINEERSEVVDFSVPFVETGISVMVSRSN--GTVSPSAFLEPFSASVWVMMFVMLLIVSAIAV 625

  Fly   360 VL------VLWMRN----RLVCGRSDLASHALQVLTTLMGNPLEARSLPRSSRLRILYAGWLLLV 414
            .:      |.:.||    :...|.|.....|:.:|..|:.|.......|:.:..:|:.:.|....
Human   626 FVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFA 690

  Fly   415 LVLRVVYQGKLF-----------------DSFRLP--YHKP-----LPTEISEL-IRSNYTLINQ 454
            ::....|...|.                 ..|:.|  |..|     :|...:|. ||:||..::|
Human   691 VIFLASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQ 755

  Fly   455 EYLDYYPR----ELTVLTRNGSKDRF-------DYIQGLGKEGKFTTTS---LIATMEYYNMMH- 504
             |:..:.:    :..|..:.|..|.|       :|..|..:..|..|..   :.||..|...:. 
Human   756 -YMTKFNQKGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQK 819

  Fly   505 ---WSTSRLTHIKEHIFLYQMVIYLRRHSLLKFAFDRKIKQLLSAGIIGYFVREFDACQYRKPFE 566
               |        |..|.|          :||:|..|.::::|.:..:.|       .|...|   
Human   820 GSPW--------KRQIDL----------ALLQFVGDGEMEELETLWLTG-------ICHNEK--- 856

  Fly   567 EDYEVTPIPLDSFCGLYYISLIWLSAAVVAFILELL 602
            .:...:.:.:|:..|::|:....::.:::.||.|.|
Human   857 NEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHL 892



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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