DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7a and GRIK4

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001269399.1 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:716 Identity:140/716 - (19%)
Similarity:252/716 - (35%) Gaps:197/716 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LEILAEQVSPSQSTLAV--MDLTQDAEH--RDERQEQLMTIILRSVGSEMALRTFQKPPAEVPAS 95
            ||.|..|...|:.||:|  :|.|:|...  ::.|.::..|||:.               |....|
Human   175 LEKLLRQFLISKDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIH---------------ANASMS 224

  Fly    96 FVVFLVNSAQAFNTLGFHFTDIHSTREFNFLILLTHRMSSRA-ERLQVL---------------- 143
            ..:.|  .|.....:..::|.|.:..||:.     .||.|.. :|:.:|                
Human   225 HTILL--KAAELGMVSAYYTYIFTNLEFSL-----QRMDSLVDDRVNILGFSIFNQSHAFFQEFA 282

  Fly   144 ----RDISRTC--VRF---HTSNVILLTEKRDGV-VLVYAYRLLNMDCDLSVN------------ 186
                :.....|  |.|   ..|:.:|.    |.| .:|.|.:.||...::.|.            
Human   283 QSLNQSWQENCDHVPFTGPALSSALLF----DAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQH 343

  Fly   187 --------------------------------LELIDIYKNGLFR-----HGHEARSFNRVL--- 211
                                            |:::...:|| ||     |..|..|.:..|   
Human   344 GTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRNG-FRQIGQWHVAEGLSMDSHLYAS 407

  Fly   212 ----SLSGCPLQVSWYPLPPFVSFIGNSSDPEERAQIWRLTGIDGELIKLLASI--FDFRILLEE 270
                :|....|.|:.....|::...||..:.|...   |..|...:::|.||.|  |:::|.|  
Human   408 NISDTLFNTTLVVTTILENPYLMLKGNHQEMEGND---RYEGFCVDMLKELAEILRFNYKIRL-- 467

  Fly   271 PCNKCLS------PDIKDDCSGCFDQVIISNSSILIGAMSGSHQHRSHFSFTSSYHQ--SSLVFI 327
                 :.      |:.....:|...::|...:.:.:..::.:.:......|:..:..  .|:::.
Human   468 -----VGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYR 527

  Fly   328 MHMSSQFGAVAQLAVPFTVIVWLALVVSSLLLVLVLWMRNRLV---------C--GRSDLASHAL 381
            :||..:.|..:.|. ||:..|||.::::.|.:..||::..||.         |  ||.:|..:..
Human   528 VHMGRKPGYFSFLD-PFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQY 591

  Fly   382 QVLTTL---MGNPLEARS--LPRSSRLRILYAGWLLLVLVLRVVYQGKLFDSFRLPYHKPLPTE- 440
            .:..:|   :|..::..|  .||:...|.:...|....|::...|...| .:|.......:|.| 
Human   592 SLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANL-AAFLTVQRMDVPIES 655

  Fly   441 ---ISELIRSNYTLI----------NQEYLDY-------YPRELTVLTRNGSKDRFDYIQGLGKE 485
               :::.....|..|          |..|..|       |.::.:|..::..       :|:.:.
Human   656 VDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTE-------EGIARV 713

  Fly   486 GKFTTTSLI-ATM-EYYNMMHWSTSRLTHIKEHIFLYQMVIYLRRHSLLKFAFDRKIKQLLSAGI 548
            .......|: :|| |||...:   ..||.|...:......|.:...|:.:..||..|.||.....
Human   714 LNSNYAFLLESTMNEYYRQRN---CNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNR 775

  Fly   549 IGYFVR---EFDACQYRKPFEEDYEVTPIPLDSFCGLYYISLIWLSAAVVAFILELLSQRIVWLR 610
            :....|   |...|    |.|||:....:.:::..|::.:.:..|..|:...:||.|     |..
Human   776 LEILKRKWWEGGKC----PKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFL-----WTL 831

  Fly   611 R 611
            |
Human   832 R 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
GRIK4NP_001269399.1 PBP1_iGluR_Kainate_KA1_2 26..400 CDD:107389 47/251 (19%)
ANF_receptor 43..382 CDD:279440 41/232 (18%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 76/391 (19%)
Lig_chan 547..816 CDD:278489 57/283 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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