DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7a and glr-8

DIOPT Version :10

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:450 Identity:74/450 - (16%)
Similarity:158/450 - (35%) Gaps:109/450 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 PPFVSFIGNSSDP-------------EERAQIWRLTGIDGELIKLLASIFDFRILLEEPCNKCLS 277
            ||:|::: |.||.             |...:|.:...:..|::..|.|.:              .
 Worm    73 PPYVNYV-NFSDAAVTDKGYGPGVVMEILKEIGKRLNLTYEILPALGSTW--------------G 122

  Fly   278 PDIKDDCSGCFDQVIISNSSILIGA--MSGSHQHRSHFSFTSSYHQSSLVFIMHMSSQFGAVAQL 340
            ..:....:|.|.|::.....:|.|.  |.......:..::...:..:.::.......:...:..:
 Worm   123 EYLNGSWTGAFGQLVRGEVDLLAGGAIMEYDRSVIADLTYPFQFEPTGIMIRSPEKYEDDTLLIV 187

  Fly   341 AVPFTVIVWL---ALVVSSLLLVLVLWMRNRLVCGRSDLASHALQVLTTLMGNPLEA-------- 394
            ..||:..||:   |:::.|.::.||:          :::.....:.:|.   .|.|:        
 Worm   188 TEPFSWEVWVITAAVILISGVIFLVM----------TNIIRKVYEEMTV---TPFESIWVFFSIF 239

  Fly   395 -----RSLPRSSRLRILYAGWLLLVLVLRVVYQGKL-----FDSFRLPYHKPLPTEISELIR--- 446
                 ...|||...|:|.|.|.|..:.|...:.|.|     .|...:|:.     .|.:|:|   
 Worm   240 VQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVPFQ-----NIDQLVRLVK 299

  Fly   447 -SNYTLINQE----------------YLDYYPRELTVLTRNGSKDRFDYIQGLGKEGKFTTT--- 491
             ..:.::..|                |.|.: .|:.|      ..:..|:.|:.:...|...   
 Worm   300 QGKFEIVMDENSFTRTEMIARSKLPVYRDLW-HEMIV------NHKVKYVNGIARGVAFVRANPG 357

  Fly   492 -SLIATMEYYNMMHWSTSRLTHIKEHIFLYQMVIYLRRHSLLKFAFDRKIKQLLSAGIIGYFVRE 555
             :|:..|...|...:|..::....:.|....:.|.|.::|:....|..||::::..|....::.:
 Worm   358 YALLGPMATLNFYAYSDCKVILFNDGILPVYLSIPLVKNSIYSPYFSTKIREMVERGFTQKWIAD 422

  Fly   556 FDACQYRKPFEEDYEVTPIP-----LDSFCGLYYISL----IWLSAAVVAFILELLSQRI 606
            :.:....:...|....|..|     |....|.:::.|    :.|:..|..||.:...:::
 Worm   423 YRSYVAMQKINECNSTTIGPKSYLDLKRAQGAFWVFLGGAGLGLALFVGEFIFKFFREKM 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 64/390 (16%)

Return to query results.
Submit another query.