DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7a and glr-7

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:534 Identity:104/534 - (19%)
Similarity:175/534 - (32%) Gaps:168/534 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VNSAQAFNTLGFHFTDIHSTREFNFLILLTHRMSSRAERLQVLRDISRTCVRFHTSNVILLTEKR 165
            :|.|...|.:|:.|..|. |....|.:|.|.                 || :...|...:.|..|
 Worm   255 LNVAFYMNVMGYAFETIR-TMNATFDVLPTF-----------------TC-QTGPSEPNITTTVR 300

  Fly   166 DGVVL--------VYAYRLLNMDC-DLSVNLELIDIYKNGLFRHGHEARSFNRVLSLSGCPLQVS 221
            | ::|        .|....|||.. |:.|.:..||..::      ||...||:.:.:        
 Worm   301 D-IILNDPAHEYGNYTEAGLNMFFQDVEVRIYKIDRDRD------HEDALFNKEVGV-------- 350

  Fly   222 WYPL---------------------------PPFVSFIGNSSDPEERAQIWRLTGIDGELIKLLA 259
            |.|:                           ||||...|:...|.|        |...:||.::.
 Worm   351 WSPISKLSVMYGTLQVDVRNLNIFRVVTLIQPPFVQRTGDPDTPYE--------GYCIDLINMIQ 407

  Fly   260 SIFDFRILLEEPCNKCLSPDIKDDCSGCFDQ---------VIISNSS-ILIGAMSGSHQHRSHFS 314
            ...:|...:.|         ::|...|..|.         .::|.|: |.:..:|...:..:...
 Worm   408 VEVNFTYTIYE---------VEDGSFGTMDDNGNWNGLIGALVSGSADIALAPLSVMAERENDVD 463

  Fly   315 FTSSYHQ-SSLVFIMHMS----SQFGAVAQLAVPFTVIVWLALVVSSLLLVLVLWM--------- 365
            ||..|:. .....:|..:    |.|..:..|..|    |||.:|.:.|...::||:         
 Worm   464 FTVPYYDLVGTTILMKKADVEYSLFKFMKVLEWP----VWLCIVAAYLFTSILLWIFDRFSPYSF 524

  Fly   366 RNRLVCGRSDLASHALQV-------LTTLMGNPLEARSLPRSSRLRILYAGWLLLVLVLRVVYQG 423
            .|.....::|:......:       :|:|  .|......|::...|::.|.|.|...::...|..
 Worm   525 TNNKERYQNDIEKRQFSLKECLWFCMTSL--TPQGGGEAPKNISGRLVAATWWLFGFIIIASYTA 587

  Fly   424 KLFDSFRLPYHKPLPTEISELIRSNYTLINQEYLDYYPRELTVLTRNGSKDRFDYIQGLGKEGKF 488
            .|.....:       :.:.:.|.|...|..|..::|.|                 |:|...|..|
 Worm   588 NLAAFLTV-------SRLEQPISSLDDLAKQYKIEYAP-----------------IKGSASETYF 628

  Fly   489 TTTSLIATME--YYNM-----MHWSTSRLTHIKEHIFLY-------QMVIYLRRHSL---LKFAF 536
            ..   :|.:|  :|||     ::.|.|.....|..::.|       .|..|::...|   :..|.
 Worm   629 RR---MAEIEETFYNMWKEMSLNESMSPRDRAKLAVWDYPVSDKFTNMWRYMQESKLPVNMDTAV 690

  Fly   537 DRKIKQLLSAGIIG 550
            ||.:..:.....||
 Worm   691 DRVLNSVDGFAFIG 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
glr-7NP_001337310.1 Periplasmic_Binding_Protein_Type_1 <102..>220 CDD:324556
PBP2_iGluR_putative 373..767 CDD:270435 73/382 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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