DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7a and glr-1

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_498887.2 Gene:glr-1 / 176204 WormBaseID:WBGene00001612 Length:962 Species:Caenorhabditis elegans


Alignment Length:777 Identity:131/777 - (16%)
Similarity:225/777 - (28%) Gaps:318/777 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VAAALEILAEQVSPSQSTLAVMDLTQDAEHRDERQEQLMTIILRSVGSEMALRTFQKPP-AEVPA 94
            |:.|||:      |..|..|   |:.|    |.:|:|...:...||          :|| :|:.|
 Worm   113 VSDALEM------PLVSLTA---LSND----DHQQQQFGNLFEVSV----------RPPISELLA 154

  Fly    95 SFVV--------FLVNSAQA---FNTLGFHF-----TDIHST---------------REFNFL-- 126
            .|:|        .|::...|   ..:|..|.     |.:.::               .:||.:  
 Worm   155 DFIVHKGWGEVLVLIDPVHASLHLPSLWRHLRTRTNTSVKASMFDLPADEKQFEAYLMQFNMMRN 219

  Fly   127 -----ILLTHRMSSRAERLQV-LRDISRTCVRFH--TSNVILLTEKRD----GVVLVYAYRLLNM 179
                 ||:......|.::|.: :|........:|  .:|...|...::    |.:.:..:.::|.
 Worm   220 NETNRILIDCASPKRLKKLLINIRSAQFNQANYHYVLANYDFLPYDQEMFQNGNINISGFNIINK 284

  Fly   180 D--------------------CDLSVN------------------LELIDIYKNGLFRHGHEARS 206
            |                    .|:||.                  |:..|...:|.|||   .|.
 Worm   285 DGREYWSLKKHLKTSSSLGGGDDVSVEAAVGHDAMLVTWHGFAKCLQANDSLFHGTFRH---RRF 346

  Fly   207 FNRVLSLSGC-PLQVSWYPLPPFVSF------------------------------IGNSSD--- 237
            |||......| ||....:|..||.||                              .||..:   
 Worm   347 FNRGFPGIYCDPLSDRSHPNRPFSSFEHGKTIGVAFRNMKIGHKEGTLTGNIEFDRFGNRKNFDV 411

  Fly   238 -------------PEERAQIWRLTGI--------------------DGELIKLLASIFDFRILLE 269
                         ..:....|| .|:                    |.::|.|...:..|.::..
 Worm   412 SIVDLVSNTKATFNSKEVLAWR-QGVGFFSNRTVAQHSRKSQNDHKDNQVIVLTNLVAPFVMIKR 475

  Fly   270 EPCNKCLSPDIKDDCSG-------CF-------DQVIISNSSILIGAMSGSHQ------------ 308
            |    ||......:|.|       |.       |::...|..|.:|..:||.|            
 Worm   476 E----CLEMANLTECQGNNKFEGFCIDLLKLLADKIEEFNYEIKLGTKAGSKQADGSWDGMIGEL 536

  Fly   309 --HRSH---------------FSFTSSYHQSSL-VFIMHMSSQFGAVAQLAVPFTVIVWLALVVS 355
              .|:|               ..|:..:..:.: :.|.....|..:|.....|.:..:|:.::.:
 Worm   537 LSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFA 601

  Fly   356 SLLLVLVLWMRNRLVCGRSDLASHALQVLTTLMG-----NPLEARS----------------LPR 399
            .:.:.:|:::.:|       .:.:..:|..|..|     |.....:                |||
 Worm   602 YIGVSVVIFLVSR-------FSPYEWRVEETSRGGFTISNDFSVYNCLWFTLAAFMQQGTDILPR 659

  Fly   400 SSRLRILYAGWLLLVLVLRVVYQGKL-----FDSFRLPYHKPLPTEISELIRSNYTLINQEYLDY 459
            |...||..:.|....:::...|...|     .:..:.|            |.|...|..|..:.|
 Worm   660 SISGRIASSAWWFFTMIIVSSYTANLAAFLTLEKMQAP------------IESVEDLAKQSKIKY 712

  Fly   460 YPRELTVLTRNGSKDRFDYIQGLGKEGKFTTTSLIATMEYYNMMHWSTSR------------LTH 512
                              .|||.|....|...|.:..  |..|..:..|:            :..
 Worm   713 ------------------GIQGGGSTASFFKYSSVQI--YQRMWRYMESQVPPVFVASYAEGIER 757

  Fly   513 IKEHIFLYQMVIYLRRHSLLKFAFDRKIKQLLSAGI----IGYFVREFDACQYRKPFEEDYE 570
            ::.|...|   .:|...:..::...||....:..|.    |||.:        ..||..|::
 Worm   758 VRSHKGRY---AFLLEATANEYENTRKPCDTMKVGANLNSIGYGI--------ATPFGSDWK 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
glr-1NP_498887.2 PBP1_iGluR_AMPA 10..439 CDD:107375 64/352 (18%)
ANF_receptor 44..417 CDD:279440 61/329 (19%)
Periplasmic_Binding_Protein_Type_2 457..832 CDD:304360 67/406 (17%)
Lig_chan 593..867 CDD:278489 43/266 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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