DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7a and Grid1

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_032192.2 Gene:Grid1 / 14803 MGIID:95812 Length:1009 Species:Mus musculus


Alignment Length:433 Identity:83/433 - (19%)
Similarity:165/433 - (38%) Gaps:57/433 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 LSGCPLQVSWYPLPPFVSFIGN-SSDPEERAQIWRLTGIDGELIKLLASIFDFRILLEEPCNKCL 276
            |.|..|:|......|||....| ...|:      |..|...:::..||....|:..:.:      
Mouse   434 LQGLTLKVVTVLEEPFVMVAENILGQPK------RYKGFSIDVLDALAKALGFKYEIYQ------ 486

  Fly   277 SPDIK-------DDCSGCFDQVIISNSSILIGAMSGSHQHRSHFSFTSSYHQSSLVFIMHMSSQF 334
            :||.:       ...:|...::|...:.:.|.|::.:.:..|...|:..|...|:..::....:.
Mouse   487 APDGRYGHQLHNTSWNGMIGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIKKPEEK 551

  Fly   335 GAVAQLAVPFTVIVWLALVVSSLLLVLVLWMRNRLVCGRSDLASHALQVLTTLMGNPL------- 392
            .::..|..||...||..:..:..::.:::::.||:...||..|:......:..:.:.:       
Mouse   552 ISIFSLFAPFDFAVWACIAAAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAF 616

  Fly   393 ---EARSLPRSSRLRILYAGWLLLVLVLRVVYQGKLFDSFRLP-YHKPLPT--EISELIRSNY-T 450
               ...|...|..:||:...|.|..|::...|...|.....:. ...|:.|  ::|:.:..:| |
Mouse   617 VQQGGESSVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQLEMSYGT 681

  Fly   451 LINQEYLDYYPRELT--------------VLTRNGSKDR--FDYIQGL--GKEGKFTTTSLIATM 497
            :.:....:|:..:.|              .:::||..|.  .:..:|:  .|:|.:.....:|.:
Mouse   682 VRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLWDVAVV 746

  Fly   498 EYYNMMHWSTSRLTHIKEHIFLYQMVIYLRRHSLLKFAFDRKIKQLLSAGIIGYFVREF----DA 558
            ||..:.....| :|.|...|......|.|:..|..:..|.::|.:|...|.:....:::    ..
Mouse   747 EYAALTDDDCS-VTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGR 810

  Fly   559 CQYRKPFEEDYEVTPIPLDSFCGLYYISLIWLSAAVVAFILEL 601
            |..........|...:.|.||.|::.|..|.|..|.:...|||
Mouse   811 CDLTSHSSTQTEGKSLKLHSFAGVFCILAIGLLLACLVAALEL 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
Grid1NP_032192.2 Interaction with CBLN1. /evidence=ECO:0000269|PubMed:27418511 21..436 1/1 (100%)
PBP1_iGluR_delta_1 25..423 CDD:107387
PBP2_iGluR_delta_1 436..806 CDD:270448 69/382 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..960
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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