DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7a and grid2

DIOPT Version :9

Sequence 1:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_031759030.1 Gene:grid2 / 100487676 XenbaseID:XB-GENE-955038 Length:1007 Species:Xenopus tropicalis


Alignment Length:657 Identity:122/657 - (18%)
Similarity:242/657 - (36%) Gaps:135/657 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 MTPLVAAALEILAEQVSPSQSTLAVMDLTQDAEHRDERQEQLMTIILRSVGSEMALR-TFQKPPA 90
            |:|..|.|  .:.|.|   ::.|...|......:.:.....:..::.||:|....:| ||..|. 
 Frog   234 MSPTTAKA--FITEVV---ETNLVAFDCHWIIINEEINDLDVQELVRRSIGRLTIIRQTFPVPH- 292

  Fly    91 EVPASFVVFLVNSAQ-AFNTLGFH------------FT---DIHSTREFNFLILLTHRMSSRAER 139
                       ||:| .|.  |.|            |:   :|.:...::.::||.:....:.|.
 Frog   293 -----------NSSQRCFR--GNHRISTSLCDPKDPFSQNMEITNMYIYDTVLLLANAFHKKLED 344

  Fly   140 LQVLRDISRTCVR-----FHTSNVILLTEKRDGVV-LVYAYRLLNMDCDLSVNLELIDI-YKNGL 197
            .:.....|.||:|     :.....:|.|.|:.||. |..|........:.::..|::.. |...|
 Frog   345 RKWHSMASLTCIRKNSKPWQGGRSMLETVKKGGVSGLTGALDFSEDGGNPNIYFEILGTNYGEEL 409

  Fly   198 FRHGHEARSFNRVLSLS-------------GCPLQVSWYPLPPFVSFIGNSSDPEERAQIWRLTG 249
            .|...:...:|.|..|:             |..|:|:.....|||....|.....::.|     |
 Frog   410 GRGIRKLGFWNPVTGLNGSLTDRKLENNMRGVVLRVATVLEEPFVMVSENVLGKPKKYQ-----G 469

  Fly   250 IDGELIKLLASIFDFRI-LLEEPCNKCLSPDIKDDCSGCFDQVIISNSSILIGAMSGSHQHRSHF 313
            ...:::..|:|...|:. :.....:|..||......:|...::::..:.:.|.|::.:....:..
 Frog   470 FSIDVLDALSSYLGFKYEIYVASDHKYGSPQADGSWNGLIGELLLKRADMGISALTITPDRENVV 534

  Fly   314 SFTSSYHQSSLVFIMHMSSQFGAVAQLAVPFTVIVWLALVVSSLLLVLVLWMRNRLVCGRSDLAS 378
            .||:.|...|:..::..:.:...:.....||.:.:|..:..:.||:.|::::.|.|...|..:.|
 Frog   535 DFTTRYMDYSVGVLLRKAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGS 599

  Fly   379 HALQVLTTLMGNPL---------EARSLPRSS-RLRILYAGWLLLVLVLRVVYQGKLF------- 426
                :.:|.:.|.:         :...:|.:: ..|::...|.|..|::...|...|.       
 Frog   600 ----MTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTISR 660

  Fly   427 ---------DSFR---LPYHKPLPTEISELIR----------SNYT----LINQEYLDYYPRELT 465
                     |..|   :||.....:.:.|.:|          |.|:    :||:.          
 Frog   661 IESSIQSLQDLSRQTDIPYGTVFDSAVYEHVRVKGMNPFERDSMYSQMWRMINRS---------- 715

  Fly   466 VLTRNGSKDRF-DYIQGLG--KEGKFTTTSLIATMEYYNMMHWSTSRLTHIKEHIFLYQMVIYLR 527
                |||::.. :.::|:.  |.|.:......|.:||..:.....|..| :...|......|.|:
 Frog   716 ----NGSENNVQESLEGIQKVKHGNYAFVWDAAVLEYIAINDQDCSFYT-VGNTIADRGYGIALQ 775

  Fly   528 RHSLLKFAFDRKIKQLLSAGIIGYFVREF----DACQYRKPFEEDYEVTPIPLDSFCGLYYISLI 588
            ..|..:..|.::|.:|...|.:.....::    ..|:.....:...:.:.:.:.||.|::.|   
 Frog   776 HGSPYRDIFSQRILELQQNGDMDILKHKWWPRNGQCELHSSMDTKQKGSSLDIKSFSGVFCI--- 837

  Fly   589 WLSAAVV 595
             |:|.:|
 Frog   838 -LAAGIV 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7aNP_572406.1 None
grid2XP_031759030.1 Periplasmic_Binding_Protein_type1 28..429 CDD:415822 44/213 (21%)
PBP2_iGluR_delta_2 440..806 CDD:270449 70/389 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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