Protein Alignment Rab39 and RABA6b

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_173258.2
• Gene: RABA6b / 838399
• AraportID: AT1G18200
• Length: 229
• Species: Arabidopsis thaliana
• Alignment Length: 231
• Identity: 94/231 - (40%)
• Similarity: 127/231 - (54%)
• Gaps: 33/231 - (14%)

  Fly     7 EYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQER 71
            :|.|:.:|||||.||||:||..|:..:|...|.||:||||..|.:.:.|.| ||.|:||||||||
plant    11 DYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKT-IKAQIWDTAGQER 74

  Fly    72 FRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHRE 136
            ||:||.||||.::|.||:|||:...:|::|..|:.|.:....| ..|..|||.|.||   |..||
plant    75 FRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSP-ETVVVLVGNKSDL---GQSRE 135

  Fly   137 VTTEEAQKFAKQHGLHFVETSARSGANVEEAF--------RMVTQEVYARIR-SGEYKAEDGWDG 192
            |..||.:..|:..||:|:||||....||||||        .::||::....| :|:...|.....
plant   136 VEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDNRLNGDGNNESNGAV 200

  Fly   193 IKSG----------FSRPNSLDFNLVVAEPEKSSCC 218
            :..|          .:||.|...         |:||
plant   201 VPPGKEIVNIHEVTATRPLSTSL---------SNCC 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	92/228 (40%)
RABA6b	NP_173258.2	Rab11_like	11..175	CDD:206660	82/168 (49%)