Protein Alignment Rab39 and RAB1A

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_568678.1
• Gene: RAB1A / 834766
• AraportID: AT5G47200
• Length: 202
• Species: Arabidopsis thaliana
• Alignment Length: 219
• Identity: 87/219 - (39%)
• Similarity: 132/219 - (60%)
• Gaps: 21/219 - (9%)

  Fly     2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDT 66
            :.|.::|.|:|:|||||.||||.||..|.|..:.:....|:||||..|.:| :||..||||:|||
plant     1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDGKTIKLQIWDT 64

  Fly    67 AGQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINA 131
            |||||||:||.||||.:.|:::.||:::..||.::..|:.|..|:...:.... |||.|.||.:
plant    65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKL-LVGNKNDLTS- 127

  Fly   132 GGHREVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSG 196
              .:.|:||.|:.||.:.|:.|:||||::..||||||..:|..:..|:.|.           .:|
plant   128 --QKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQ-----------PAG 179

  Fly   197 FSRPNSLDFNLVVAEP--EKSSCC 218
            .::|.::.   :..:|  ::|.||
plant   180 GAKPPTVQ---IRGQPVNQQSGCC 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	84/211 (40%)
RAB1A	NP_568678.1	Rab1_Ypt1	7..172	CDD:206661	78/169 (46%)