Protein Alignment Rab39 and RABA1c

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_199387.1
• Gene: RABA1c / 834614
• AraportID: AT5G45750
• Length: 216
• Species: Arabidopsis thaliana
• Alignment Length: 213
• Identity: 87/213 - (40%)
• Similarity: 132/213 - (61%)
• Gaps: 8/213 - (3%)

  Fly     6 FEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQE 70
            ::|.|:::|||||.||||:||..||..:|:..|..|:||:|..|.:.:.|.. ||.|:|||||||
plant    10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKV-IKAQIWDTAGQE 73

  Fly    71 RFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHR 135
            |:|:||.:|||.:||.|||||::.|::||::..|:.|.:.|.:|: .|..|||.|.||.:...
plant    74 RYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPN-IVVMLVGNKSDLRHLVA-- 135

  Fly   136 EVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSGFSRP 200
             |.||:|:.||::..|:|:||||....|||.||..|..:::..:..   ||.:......:..|:.
plant   136 -VQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK---KAMEAASESANVPSKG 196

  Fly   201 NSLDFNLVVAEPEKSSCC 218
            :.:|....|:..:|..||
plant   197 DKIDIGKDVSAVKKGGCC 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	85/209 (41%)
RABA1c	NP_199387.1	Rab11_like	11..175	CDD:206660	79/168 (47%)