DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab39 and rasef

DIOPT Version :10

Sequence 1:NP_572405.2 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001072877.1 Gene:rasef / 780339 XenbaseID:XB-GENE-1002559 Length:722 Species:Xenopus tropicalis


Alignment Length:223 Identity:80/223 - (35%)
Similarity:115/223 - (51%) Gaps:33/223 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMK----DGTQIKLQLWDTA 67
            |..::::|.||:.|||||.|......:|...:..|:||||     :||    ||....|||||||
 Frog   520 EKAYKIVLAGDAAVGKSSFLMRLCKNEFRGNTSATLGVDF-----QMKTLVVDGEPTILQLWDTA 579

  Fly    68 GQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLD---LI 129
            ||||||||.|||:|.:.||||:||::...||.::..|:...:.......|:. :||.|.|   |:
 Frog   580 GQERFRSIAKSYFRRADGVLLLYDVTCEKSFLNVREWIDMIEDATSEAIPIM-MVGNKADLRQLM 643

  Fly   130 NAGGHREVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIK 194
            ...||..|:|...:|.::.:|..|.||||:.|:|:.||...:.:||..|..:     ||....:.
 Frog   644 AEQGHICVSTNYGEKLSRTYGALFCETSAKEGSNIVEAVLHLAREVRKRCDN-----EDDRGSVT 703

  Fly   195 SGFSRPNSLDFNLVVAEPEK----SSCC 218
                       ||..|..:|    .:||
 Frog   704 -----------NLSAAISKKPAQMKNCC 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab39NP_572405.2 Rab39 8..218 CDD:133311 77/220 (35%)
rasefNP_001072877.1 FRQ1 <9..70 CDD:444056
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..109
EnvC 213..>357 CDD:443969
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..384
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..491
Rab 523..687 CDD:206640 68/169 (40%)
Blue background indicates that the domain is not in the aligned region.

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