DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rab39 and Rab42

DIOPT Version :9

Sequence 1:	NP_001245568.1	Gene:	Rab39 / 31684	FlyBaseID:	FBgn0029959	Length:	218	Species:	Drosophila melanogaster
Sequence 2:	XP_008762416.2	Gene:	Rab42 / 682865	RGDID:	1593983	Length:	215	Species:	Rattus norvegicus

Alignment Length:	215	Identity:	99/215 - (46%)
Similarity:	134/215 - (62%)	Gaps:	23/215 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 YQFRLILIGDSTVGKSSLLKFFTDGK--FAELS-DPTVGVDFFARLIEMKDGTQIKLQLWDTAGQ 69
            ||||:.|:||:.|||:|||:.:..|.  .|||. :|||||:|::|.:.:..|.::||||||||||
  Rat     8 YQFRIALLGDAAVGKTSLLRCYVAGARGAAELDPEPTVGVEFYSRALRLPAGLRVKLQLWDTAGQ 72

  Fly    70 ERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPH---RPVFALVGCKLDLINA 131
            ||||.||:|:|||.||||||:|::|..|||||..|..|.   |..|   :.:|.|||.|.||
  Rat    73 ERFRCITRSFYRNMVGVLLVFDVTNRESFEHIQAWHQEV---ISTHGSDKVIFLLVGHKCDL--- 131

  Fly   132 GGHREVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSG 196
             ..|.|:|:||::.|...|:.||||||:|..||:.||..||..:...::.|:.|.|:.|.|::..
  Rat   132 -STRCVSTQEAEELAASLGMAFVETSAKSNCNVDLAFDTVTSAIEQALQQGDIKLEEDWAGVRLL 195

  Fly   197 FSRPNSLDFNLVVAEPEKSS 216
            ...||          |..||
  Rat   196 HRAPN----------PRSSS 205

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_001245568.1	Rab39	8..218	CDD:133311	99/215 (46%)
Rab42	XP_008762416.2	P-loop_NTPase	8..215	CDD:422963	99/215 (46%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1416096at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR47979
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	4.020