Protein Alignment Rab39 and rab42b

DIOPT Version :9

• Sequence 1: NP_001245568.1
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_001017683.2
• Gene: rab42b / 550378
• ZFINID: ZDB-GENE-050417-172
• Length: 218
• Species: Danio rerio
• Alignment Length: 213
• Identity: 102/213 - (47%)
• Similarity: 144/213 - (67%)
• Gaps: 1/213 - (0%)

  Fly     5 IFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQ 69
            :::||||:|::|||||||||:||.:|:..|.|..:.||||||:...:|::.|.::|||.||||||
Zfish     5 LWQYQFRIIMLGDSTVGKSSMLKRYTEDLFLECINQTVGVDFYVHFLEVEPGVRVKLQFWDTAGQ 69

  Fly    70 ERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGH 134
            |||||:|:||||||||.|||:|:.|..|||::..|..|....:.|:..:|.|||.|.|.:. ||.
Zfish    70 ERFRSVTRSYYRNSVGGLLVFDLGNRKSFENVREWYAEVCERVHPYTVLFVLVGHKSDRVK-GGE 133

  Fly   135 REVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSGFSR 199
            |.|...||:|.|.|.|..::|.||::|.||:|||.::|:.:|..::|||.:..:||||:||....
Zfish   134 RAVDRTEAEKLASQLGAPYIEASAKTGHNVKEAFDLLTRRIYQGLKSGEIQLREGWDGVKSSAPT 198

  Fly   200 PNSLDFNLVVAEPEKSSC 217
            ..:|.........||.||
Zfish   199 AQTLQKLQNNESAEKKSC 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_001245568.1	Rab39	8..218	CDD:133311	102/210 (49%)
rab42b	NP_001017683.2	P-loop_NTPase	8..218	CDD:304359	102/210 (49%)
		RAB	10..176	CDD:197555	85/166 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1416096at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR47979
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	4.020