Protein Alignment Rab39 and Rab4b

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_059051.1
• Gene: Rab4b / 50866
• RGDID: 620931
• Length: 213
• Species: Rattus norvegicus
• Alignment Length: 218
• Identity: 86/218 - (39%)
• Similarity: 128/218 - (58%)
• Gaps: 15/218 - (6%)

  Fly     6 FEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQE 70
            :::.|:.::||.:..|||.||..|.:.||.:.|:.|:||:|.:|::.: .|..:|||:|||||||
  Rat     5 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNV-GGKTVKLQIWDTAGQE 68

  Fly    71 RFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHR 135
            ||||:|:||||.:.|.||||||::..::..:..|:.:|:....|: .|..|.|.|.||   ...|
  Rat    69 RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPN-IVVILCGNKKDL---DPER 129

  Fly   136 EVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSG---- 196
            |||..||.:||:::.|.|:||||.:|.||||||....:.:..:|.|||...|....||:.|
  Rat   130 EVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYGDISL 194

  Fly   197 --FSRPNSLDFNLVVAEPEKSSC 217
              ..:|.|..    ...|:...|
  Rat   195 RQLRQPRSAQ----AVAPQPCGC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	86/216 (40%)
Rab4b	NP_059051.1	Rab4	9..169	CDD:206696	74/164 (45%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P61106	39..44		2/4 (50%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P61106	65..74		8/8 (100%)