DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab39 and zgc:101559

DIOPT Version :10

Sequence 1:NP_572405.2 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001007418.1 Gene:zgc:101559 / 492776 ZFINID:ZDB-GENE-041114-122 Length:233 Species:Danio rerio


Alignment Length:210 Identity:81/210 - (38%)
Similarity:114/210 - (54%) Gaps:16/210 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFR- 73
            |::|:||||.|||:.|...|..|||....:.|:||||..|.::: ||..||||:|||||||||| 
Zfish    37 FKIIVIGDSNVGKTCLTYRFCGGKFLSNPEATIGVDFRERTLQL-DGENIKLQIWDTAGQERFRK 100

  Fly    74 SITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHREVT 138
            |:.:.||||...::.|||:::.||||.:|.|:.|...|..|......|||.|.||..:   |||:
Zfish   101 SMVEHYYRNVHAIIFVYDVTSLASFESLPEWIEECNHHSVPPMVPRILVGNKCDLRES---REVS 162

  Fly   139 TEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSGFSRPNSL 203
            |..||:.|..:.....|||||..|..|....:.....| |:::..          .....:|:..
Zfish   163 TFLAQRLADSYNFPLFETSARDLAEKEHVDAIFLTLAY-RLKNHR----------PLRLKQPSES 216

  Fly   204 DFNLVVAEPEKSSCC 218
            :|..:.||.|:.:.|
Zfish   217 NFIQLAAEQEEKTPC 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab39NP_572405.2 Rab39 8..218 CDD:133311 80/208 (38%)
zgc:101559NP_001007418.1 Rab33B_Rab33A 35..204 CDD:133315 75/171 (44%)

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