Protein Alignment Rab39 and rab1a

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_001004787.1
• Gene: rab1a / 448007
• XenbaseID: XB-GENE-485527
• Length: 204
• Species: Xenopus tropicalis
• Alignment Length: 181
• Identity: 81/181 - (44%)
• Similarity: 114/181 - (62%)
• Gaps: 5/181 - (2%)

  Fly     2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDT 66
            :.|.::|.|:|:|||||.||||.||..|.|..:.|....|:||||..|.||: ||..||||:|||
 Frog     4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDT 67

  Fly    67 AGQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINA 131
            |||||||:||.||||.:.|:::|||:::..||.::..|:.|..|:...:.... |||.|.||..
 Frog    68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL-LVGNKCDLTT- 130

  Fly   132 GGHREVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSG 182
              .:.|....|::||...|:.|:||||::..|||:||..:..|:..|:..|
 Frog   131 --KKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	80/175 (46%)
rab1a	NP_001004787.1	Rab1_Ypt1	10..175	CDD:206661	78/169 (46%)