Protein Alignment Rab39 and rab3db

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: XP_005168533.1
• Gene: rab3db / 436952
• ZFINID: ZDB-GENE-040718-428
• Length: 231
• Species: Danio rerio
• Alignment Length: 213
• Identity: 77/213 - (36%)
• Similarity: 121/213 - (56%)
• Gaps: 15/213 - (7%)

  Fly     6 FEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQE 70
            |:|.|:|::||:|:|||:|.|..:.|..|......|||:||..:.: .::..:||||:|||||||
Zfish    32 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNNKRIKLQIWDTAGQE 95

  Fly    71 RFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHR 135
            |:|:||.:|||.::|.||::||:|..||..:..|..:.:.:...:..|. |||.|.||.:   .|
Zfish    96 RYRTITTAYYRGAMGFLLMFDITNRDSFNAVRDWATQIKTYSWDNAQVI-LVGNKCDLED---ER 156

  Fly   136 EVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSGFSRP 200
            .:.||::|:.|.:.|..|.|.||:...||::.|..:...:..::.    ::.|| |...|
Zfish   157 LIPTEDSQRLAHELGFQFFEASAKDSINVKQVFECLVDVICDKMT----ESLDG-DAAVS----- 211

  Fly   201 NSLDFNLVVAEPEKSSCC 218
            |..|.:|..|..|..|.|
Zfish   212 NHKDCSLQDAADEGHSAC 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	75/209 (36%)
rab3db	XP_005168533.1	P-loop containing Nucleoside Triphosphate Hydrolases	35..199	CDD:476819	64/168 (38%)