Protein Alignment Rab39 and Rab1

DIOPT Version :9

• Sequence 1: NP_001245568.1
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 89/224 - (39%)
• Similarity: 127/224 - (56%)
• Gaps: 29/224 - (12%)

  Fly     2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDT 66
            |.|.::|.|:|:|||||.||||.||..|.|..:.|....|:||||..|.||: ||..||||:|||
  Fly     4 VNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDT 67

  Fly    67 AGQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCK-LDLIN 130
            |||||||:||.||||.:.|:::|||.::..||.::..|:.|.:|:           .|: ::.:.
  Fly    68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERY-----------ACENVNKLL 121

  Fly   131 AGGHREVTTEE------AQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDG 189
            .|...::||::      |.::|.|.|:.|:||||:|..|||:||..:..|:..|: .....|.|.
  Fly   122 VGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV-GPPSSATDN 185

  Fly   190 WDGIKSGFSRPNSLDFNLVVAEPEKSSCC 218
            ...:|....||         .|..||.||
  Fly   186 ASKVKIDQGRP---------VENTKSGCC 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_001245568.1	Rab39	8..218	CDD:133311	85/216 (39%)
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	76/176 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454475
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840