DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab39 and Rab26

DIOPT Version :10

Sequence 1:NP_572405.2 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster


Alignment Length:203 Identity:79/203 - (38%)
Similarity:131/203 - (64%) Gaps:13/203 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAE---LSDPTVGVDFFARLIEMKDGTQIKLQLW 64
            |..|:...::|::|||.|||:|||..|.||::..   ||  |||:||..::: :.|||::|||:|
  Fly   206 EDEFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLS--TVGIDFRNKVV-VVDGTRVKLQIW 267

  Fly    65 DTAGQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLI 129
            ||||||||||:|.:|||::..:||:||::|..::::|..|:.|.:.:.: ...|..|:|.|.|. 
  Fly   268 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQ-EDVVIVLIGNKADC- 330

  Fly   130 NAGGHREVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIK 194
             :|..|:|..|:.::..::|.:.|:||||::|.|||.:|..|.:::.:|   |....:||...:.
  Fly   331 -SGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSR---GYEHGDDGKFNVH 391

  Fly   195 SGFSRPNS 202
            . |.|.|:
  Fly   392 D-FVRDNT 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab39NP_572405.2 Rab39 8..218 CDD:133311 77/198 (39%)
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 77/195 (39%)

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