DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab39 and Rab32

DIOPT Version :10

Sequence 1:NP_572405.2 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster


Alignment Length:223 Identity:61/223 - (27%)
Similarity:118/223 - (52%) Gaps:29/223 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQER 71
            |:.:::::||:...||:|.:|.:....|::....|:||||..::::....|.::|||||.|||||
  Fly   481 EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQER 545

  Fly    72 FRSITKSYYRNSVGVLLVYDISNHASFEHIPLWM--MEAQRHIEPHRPV-FALVGCKLDLINAGG 133
            |.::|:.||:.:||..:|:|::...:|:.:..|.  ::::..:....|: ..|:..|.|....| 
  Fly   546 FGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANKCDQEKQG- 609

  Fly   134 HREVTT--EEAQKFAKQHGL-HFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKS 195
               :.|  |:..::.:::|. .:.||||:...|::||.|.:..::   :.:.:..:.|..||.| 
  Fly   610 ---IITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKI---LINDKLISADLADGDK- 667

  Fly   196 GFSRPNSLDFNLVVAE------PEKSSC 217
                     |||..|:      ..|.||
  Fly   668 ---------FNLSAADATGSDAKNKCSC 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab39NP_572405.2 Rab39 8..218 CDD:133311 60/222 (27%)
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 61/223 (27%)
Rab32_Rab38 484..686 CDD:206692 58/218 (27%)

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