Protein Alignment Rab39 and ypt1

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_596205.1
• Gene: ypt1 / 2539784
• PomBaseID: SPBC1703.10
• Length: 203
• Species: Schizosaccharomyces pombe
• Alignment Length: 218
• Identity: 81/218 - (37%)
• Similarity: 128/218 - (58%)
• Gaps: 16/218 - (7%)

  Fly     2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDT 66
            :.|.::|.|:|:|||||.||||.||..|.|..:.|....|:||||..|..|: :|..:|||:|||
pombe     1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFEL-EGKTVKLQIWDT 64

  Fly    67 AGQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRH-IEPHRPVFALVGCKLDLIN 130
            |||||||:||.||||.:.|:::|||:::..||.::..|:.|..|: :|....:  |||.|.|:::
pombe    65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRL--LVGNKSDMVD 127

  Fly   131 AGGHREVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKS 195
               .:.|....|::||....:.|:||||:...|||:||..:::::..|:.:..:.:.:....:|.
pombe   128 ---KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKV 189

  Fly   196 GFSRPNSLDFNLVVAEPEKSSCC 218
            |.....|         ...|:||
pombe   190 GQGTNVS---------QSSSNCC 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	78/210 (37%)
ypt1	NP_596205.1	Rab1_Ypt1	7..172	CDD:206661	73/170 (43%)